Gene : Cagra.9781s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12864:SF14 - RAN-BINDING PROTEINS 9/10 HOMOLOG Genomic Order:  3
Name:  ? Cagra.9781s0003 Secondary Identifier:  ? PAC:28917239
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9781s0003 0.5kb upstream 0.5kb upstream 4510 true Scaffold9781: 14065-18574 Capsella grandiflora
Cagra.9781s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold9781: 18075-18574 Capsella grandiflora
Cagra.9781s0003 0.5kb downstream 0.5kb downstream 4510 true Scaffold9781: 13565-18074 Capsella grandiflora
Cagra.9781s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold9781: 13565-14064 Capsella grandiflora
Cagra.9781s0003 1.0kb upstream 1.0kb upstream 5010 true Scaffold9781: 14065-19074 Capsella grandiflora
Cagra.9781s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold9781: 18075-19074 Capsella grandiflora
Cagra.9781s0003 1.0kb downstream 1.0kb downstream 5010 true Scaffold9781: 13065-18074 Capsella grandiflora
Cagra.9781s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold9781: 13065-14064 Capsella grandiflora
Cagra.9781s0003 2.0kb upstream 2.0kb upstream 6010 true Scaffold9781: 14065-20074 Capsella grandiflora
Cagra.9781s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold9781: 18075-20074 Capsella grandiflora
Cagra.9781s0003 2.0kb downstream 2.0kb downstream 6010 true Scaffold9781: 12065-18074 Capsella grandiflora
Cagra.9781s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold9781: 12065-14064 Capsella grandiflora
Cagra.9781s0003 5.0kb upstream 5.0kb upstream 9010 true Scaffold9781: 14065-23074 Capsella grandiflora
Cagra.9781s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold9781: 18075-23074 Capsella grandiflora
Cagra.9781s0003 5.0kb downstream 5.0kb downstream 9010 true Scaffold9781: 9065-18074 Capsella grandiflora
Cagra.9781s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold9781: 9065-14064 Capsella grandiflora
Cagra.9781s0003 10.0kb upstream 10.0kb upstream 14010 true Scaffold9781: 14065-28074 Capsella grandiflora
Cagra.9781s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold9781: 18075-28074 Capsella grandiflora
Cagra.9781s0003 10.0kb downstream 10.0kb downstream 14010 true Scaffold9781: 4065-18074 Capsella grandiflora
Cagra.9781s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold9781: 4065-14064 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372147 5261 Brassicaceae View MSA
123841623 5264 Brassicales-Malvales View MSA
124337701 5266 SBM View MSA
124238008 5268 Malvidae View MSA
124067984 5270 Rosid View MSA
123741601 5271 Pentapetalae View MSA
122788253 5272 Eudicot View MSA
122046700 5273 Angiosperm View MSA
121346795 5274 Embryophyte View MSA
123424255 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain