Gene : Cagra.9757s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31311:SF3 - GLYCOSYLTRANSFERASE 6-RELATED Genomic Order:  4
Name:  ? Cagra.9757s0004 Secondary Identifier:  ? PAC:28894015
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5936 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9757s0004 0.5kb upstream 0.5kb upstream 2349 true Scaffold9757: 8568-10916 Capsella grandiflora
Cagra.9757s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold9757: 8568-9067 Capsella grandiflora
Cagra.9757s0004 0.5kb downstream 0.5kb downstream 2349 true Scaffold9757: 9068-11416 Capsella grandiflora
Cagra.9757s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold9757: 10917-11416 Capsella grandiflora
Cagra.9757s0004 1.0kb upstream 1.0kb upstream 2849 true Scaffold9757: 8068-10916 Capsella grandiflora
Cagra.9757s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold9757: 8068-9067 Capsella grandiflora
Cagra.9757s0004 1.0kb downstream 1.0kb downstream 2849 true Scaffold9757: 9068-11916 Capsella grandiflora
Cagra.9757s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold9757: 10917-11916 Capsella grandiflora
Cagra.9757s0004 2.0kb upstream 2.0kb upstream 3849 true Scaffold9757: 7068-10916 Capsella grandiflora
Cagra.9757s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold9757: 7068-9067 Capsella grandiflora
Cagra.9757s0004 2.0kb downstream 2.0kb downstream 3849 true Scaffold9757: 9068-12916 Capsella grandiflora
Cagra.9757s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold9757: 10917-12916 Capsella grandiflora
Cagra.9757s0004 5.0kb upstream 5.0kb upstream 6849 true Scaffold9757: 4068-10916 Capsella grandiflora
Cagra.9757s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold9757: 4068-9067 Capsella grandiflora
Cagra.9757s0004 5.0kb downstream 5.0kb downstream 6849 true Scaffold9757: 9068-15916 Capsella grandiflora
Cagra.9757s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold9757: 10917-15916 Capsella grandiflora
Cagra.9757s0004 10.0kb upstream 10.0kb upstream 10916 true Scaffold9757: 1-10916 Capsella grandiflora
Cagra.9757s0004 10.0kb upstream 10.0kb upstream 9067 false Scaffold9757: 1-9067 Capsella grandiflora
Cagra.9757s0004 10.0kb downstream 10.0kb downstream 11849 true Scaffold9757: 9068-20916 Capsella grandiflora
Cagra.9757s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold9757: 10917-20916 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041044 5273 Angiosperm View MSA
122378739 5261 Brassicaceae View MSA
123827372 5264 Brassicales-Malvales View MSA
124337497 5266 SBM View MSA
124238551 5268 Malvidae View MSA
124070170 5270 Rosid View MSA
123745893 5271 Pentapetalae View MSA
122788546 5272 Eudicot View MSA
121352143 5274 Embryophyte View MSA
123428220 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain