Gene : Cagra.9801s0009 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11995 - NADH DEHYDROGENASE Genomic Order:  9
Name:  ? Cagra.9801s0009 Secondary Identifier:  ? PAC:28904302
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-3781 Capsella grandiflora pathologic  
Cgrandiflora PWY-4302 Capsella grandiflora pathologic  
Cgrandiflora PWY-5083 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.9801s0009 0.5kb upstream 0.5kb upstream 2551 true Scaffold9801: 36540-39090 Capsella grandiflora
Cagra.9801s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold9801: 38591-39090 Capsella grandiflora
Cagra.9801s0009 0.5kb downstream 0.5kb downstream 2551 true Scaffold9801: 36040-38590 Capsella grandiflora
Cagra.9801s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold9801: 36040-36539 Capsella grandiflora
Cagra.9801s0009 1.0kb upstream 1.0kb upstream 3051 true Scaffold9801: 36540-39590 Capsella grandiflora
Cagra.9801s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold9801: 38591-39590 Capsella grandiflora
Cagra.9801s0009 1.0kb downstream 1.0kb downstream 3051 true Scaffold9801: 35540-38590 Capsella grandiflora
Cagra.9801s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold9801: 35540-36539 Capsella grandiflora
Cagra.9801s0009 2.0kb upstream 2.0kb upstream 4051 true Scaffold9801: 36540-40590 Capsella grandiflora
Cagra.9801s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold9801: 38591-40590 Capsella grandiflora
Cagra.9801s0009 2.0kb downstream 2.0kb downstream 4051 true Scaffold9801: 34540-38590 Capsella grandiflora
Cagra.9801s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold9801: 34540-36539 Capsella grandiflora
Cagra.9801s0009 5.0kb upstream 5.0kb upstream 7051 true Scaffold9801: 36540-43590 Capsella grandiflora
Cagra.9801s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold9801: 38591-43590 Capsella grandiflora
Cagra.9801s0009 5.0kb downstream 5.0kb downstream 7051 true Scaffold9801: 31540-38590 Capsella grandiflora
Cagra.9801s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold9801: 31540-36539 Capsella grandiflora
Cagra.9801s0009 10.0kb upstream 10.0kb upstream 12051 true Scaffold9801: 36540-48590 Capsella grandiflora
Cagra.9801s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold9801: 38591-48590 Capsella grandiflora
Cagra.9801s0009 10.0kb downstream 10.0kb downstream 12051 true Scaffold9801: 26540-38590 Capsella grandiflora
Cagra.9801s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold9801: 26540-36539 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041386 5273 Angiosperm View MSA
122370395 5261 Brassicaceae View MSA
123830122 5264 Brassicales-Malvales View MSA
124350189 5266 SBM View MSA
124250688 5268 Malvidae View MSA
124062804 5270 Rosid View MSA
123752382 5271 Pentapetalae View MSA
122791992 5272 Eudicot View MSA
121350151 5274 Embryophyte View MSA
123428091 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain