Gene : Cagra.16771s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR22891:SF20 - PROTEIN ARGONAUTE 4-RELATED Genomic Order:  1
Name:  ? Cagra.16771s0001 Secondary Identifier:  ? PAC:28909582
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.16771s0001 0.5kb upstream 0.5kb upstream 6347 true Scaffold16771: 1-6347 Capsella grandiflora
Cagra.16771s0001 0.5kb upstream 0.5kb upstream 173 false Scaffold16771: 1-173 Capsella grandiflora
Cagra.16771s0001 0.5kb downstream 0.5kb downstream 6674 true Scaffold16771: 174-6847 Capsella grandiflora
Cagra.16771s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold16771: 6348-6847 Capsella grandiflora
Cagra.16771s0001 1.0kb upstream 1.0kb upstream 6347 true Scaffold16771: 1-6347 Capsella grandiflora
Cagra.16771s0001 1.0kb upstream 1.0kb upstream 173 false Scaffold16771: 1-173 Capsella grandiflora
Cagra.16771s0001 1.0kb downstream 1.0kb downstream 7174 true Scaffold16771: 174-7347 Capsella grandiflora
Cagra.16771s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold16771: 6348-7347 Capsella grandiflora
Cagra.16771s0001 2.0kb upstream 2.0kb upstream 6347 true Scaffold16771: 1-6347 Capsella grandiflora
Cagra.16771s0001 2.0kb upstream 2.0kb upstream 173 false Scaffold16771: 1-173 Capsella grandiflora
Cagra.16771s0001 2.0kb downstream 2.0kb downstream 8174 true Scaffold16771: 174-8347 Capsella grandiflora
Cagra.16771s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold16771: 6348-8347 Capsella grandiflora
Cagra.16771s0001 5.0kb upstream 5.0kb upstream 6347 true Scaffold16771: 1-6347 Capsella grandiflora
Cagra.16771s0001 5.0kb upstream 5.0kb upstream 173 false Scaffold16771: 1-173 Capsella grandiflora
Cagra.16771s0001 5.0kb downstream 5.0kb downstream 11174 true Scaffold16771: 174-11347 Capsella grandiflora
Cagra.16771s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold16771: 6348-11347 Capsella grandiflora
Cagra.16771s0001 10.0kb upstream 10.0kb upstream 6347 true Scaffold16771: 1-6347 Capsella grandiflora
Cagra.16771s0001 10.0kb upstream 10.0kb upstream 173 false Scaffold16771: 1-173 Capsella grandiflora
Cagra.16771s0001 10.0kb downstream 10.0kb downstream 16174 true Scaffold16771: 174-16347 Capsella grandiflora
Cagra.16771s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold16771: 6348-16347 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361616 5261 Brassicaceae View MSA
123798212 5264 Brassicales-Malvales View MSA
124295882 5266 SBM View MSA
124148197 5268 Malvidae View MSA
123874244 5270 Rosid View MSA
123458247 5271 Pentapetalae View MSA
122796647 5272 Eudicot View MSA
122050518 5273 Angiosperm View MSA
121349761 5274 Embryophyte View MSA
123381432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain