Gene : Cagra.16771s0003 C. grandiflora v1.1
Defline:  (1 of 3) PTHR10343:SF51 - SNF1-RELATED PROTEIN KINASE REGULATORY SUBUNIT BETA-1 Genomic Order:  3
Name:  ? Cagra.16771s0003 Secondary Identifier:  ? PAC:28909586
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.16771s0003 0.5kb upstream 0.5kb upstream 3325 true Scaffold16771: 13774-17098 Capsella grandiflora
Cagra.16771s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold16771: 13774-14273 Capsella grandiflora
Cagra.16771s0003 0.5kb downstream 0.5kb downstream 3325 true Scaffold16771: 14274-17598 Capsella grandiflora
Cagra.16771s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold16771: 17099-17598 Capsella grandiflora
Cagra.16771s0003 1.0kb upstream 1.0kb upstream 3825 true Scaffold16771: 13274-17098 Capsella grandiflora
Cagra.16771s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold16771: 13274-14273 Capsella grandiflora
Cagra.16771s0003 1.0kb downstream 1.0kb downstream 3825 true Scaffold16771: 14274-18098 Capsella grandiflora
Cagra.16771s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold16771: 17099-18098 Capsella grandiflora
Cagra.16771s0003 2.0kb upstream 2.0kb upstream 4825 true Scaffold16771: 12274-17098 Capsella grandiflora
Cagra.16771s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold16771: 12274-14273 Capsella grandiflora
Cagra.16771s0003 2.0kb downstream 2.0kb downstream 4825 true Scaffold16771: 14274-19098 Capsella grandiflora
Cagra.16771s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold16771: 17099-19098 Capsella grandiflora
Cagra.16771s0003 5.0kb upstream 5.0kb upstream 7825 true Scaffold16771: 9274-17098 Capsella grandiflora
Cagra.16771s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold16771: 9274-14273 Capsella grandiflora
Cagra.16771s0003 5.0kb downstream 5.0kb downstream 7825 true Scaffold16771: 14274-22098 Capsella grandiflora
Cagra.16771s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold16771: 17099-22098 Capsella grandiflora
Cagra.16771s0003 10.0kb upstream 10.0kb upstream 12825 true Scaffold16771: 4274-17098 Capsella grandiflora
Cagra.16771s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold16771: 4274-14273 Capsella grandiflora
Cagra.16771s0003 10.0kb downstream 10.0kb downstream 12825 true Scaffold16771: 14274-27098 Capsella grandiflora
Cagra.16771s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold16771: 17099-27098 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365436 5261 Brassicaceae View MSA
123841010 5264 Brassicales-Malvales View MSA
124339710 5266 SBM View MSA
124245123 5268 Malvidae View MSA
124068793 5270 Rosid View MSA
123737667 5271 Pentapetalae View MSA
122785894 5272 Eudicot View MSA
122041753 5273 Angiosperm View MSA
121345261 5274 Embryophyte View MSA
123426874 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain