Gene : Cagra.16778s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11741 - ELONGATION FACTOR TS Genomic Order:  3
Name:  ? Cagra.16778s0003 Secondary Identifier:  ? PAC:28909815
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.16778s0003 0.5kb upstream 0.5kb upstream 2913 true Scaffold16778: 8615-11527 Capsella grandiflora
Cagra.16778s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold16778: 8615-9114 Capsella grandiflora
Cagra.16778s0003 0.5kb downstream 0.5kb downstream 2913 true Scaffold16778: 9115-12027 Capsella grandiflora
Cagra.16778s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold16778: 11528-12027 Capsella grandiflora
Cagra.16778s0003 1.0kb upstream 1.0kb upstream 3413 true Scaffold16778: 8115-11527 Capsella grandiflora
Cagra.16778s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold16778: 8115-9114 Capsella grandiflora
Cagra.16778s0003 1.0kb downstream 1.0kb downstream 3413 true Scaffold16778: 9115-12527 Capsella grandiflora
Cagra.16778s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold16778: 11528-12527 Capsella grandiflora
Cagra.16778s0003 2.0kb upstream 2.0kb upstream 4413 true Scaffold16778: 7115-11527 Capsella grandiflora
Cagra.16778s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold16778: 7115-9114 Capsella grandiflora
Cagra.16778s0003 2.0kb downstream 2.0kb downstream 4413 true Scaffold16778: 9115-13527 Capsella grandiflora
Cagra.16778s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold16778: 11528-13527 Capsella grandiflora
Cagra.16778s0003 5.0kb upstream 5.0kb upstream 7413 true Scaffold16778: 4115-11527 Capsella grandiflora
Cagra.16778s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold16778: 4115-9114 Capsella grandiflora
Cagra.16778s0003 5.0kb downstream 5.0kb downstream 7413 true Scaffold16778: 9115-16527 Capsella grandiflora
Cagra.16778s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold16778: 11528-16527 Capsella grandiflora
Cagra.16778s0003 10.0kb upstream 10.0kb upstream 11527 true Scaffold16778: 1-11527 Capsella grandiflora
Cagra.16778s0003 10.0kb upstream 10.0kb upstream 9114 false Scaffold16778: 1-9114 Capsella grandiflora
Cagra.16778s0003 10.0kb downstream 10.0kb downstream 10291 true Scaffold16778: 9115-19405 Capsella grandiflora
Cagra.16778s0003 10.0kb downstream 10.0kb downstream 7878 false Scaffold16778: 11528-19405 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370955 5261 Brassicaceae View MSA
123832572 5264 Brassicales-Malvales View MSA
124344645 5266 SBM View MSA
124238849 5268 Malvidae View MSA
124066147 5270 Rosid View MSA
123739462 5271 Pentapetalae View MSA
122788886 5272 Eudicot View MSA
122045608 5273 Angiosperm View MSA
121344027 5274 Embryophyte View MSA
123428699 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain