Gene : Cagra.17103s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22870:SF91 - REGULATOR OF CHROMOSOME CONDENSATION (RCC1) FAMILY WITH FYVE ZINC FINGER DOMAIN-RELATED Genomic Order:  1
Name:  ? Cagra.17103s0001 Secondary Identifier:  ? PAC:28895053
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.17103s0001 0.5kb upstream 0.5kb upstream 5299 true Scaffold17103: 2048-7346 Capsella grandiflora
Cagra.17103s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold17103: 6847-7346 Capsella grandiflora
Cagra.17103s0001 0.5kb downstream 0.5kb downstream 5299 true Scaffold17103: 1548-6846 Capsella grandiflora
Cagra.17103s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold17103: 1548-2047 Capsella grandiflora
Cagra.17103s0001 1.0kb upstream 1.0kb upstream 5799 true Scaffold17103: 2048-7846 Capsella grandiflora
Cagra.17103s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold17103: 6847-7846 Capsella grandiflora
Cagra.17103s0001 1.0kb downstream 1.0kb downstream 5799 true Scaffold17103: 1048-6846 Capsella grandiflora
Cagra.17103s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold17103: 1048-2047 Capsella grandiflora
Cagra.17103s0001 2.0kb upstream 2.0kb upstream 6799 true Scaffold17103: 2048-8846 Capsella grandiflora
Cagra.17103s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold17103: 6847-8846 Capsella grandiflora
Cagra.17103s0001 2.0kb downstream 2.0kb downstream 6799 true Scaffold17103: 48-6846 Capsella grandiflora
Cagra.17103s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold17103: 48-2047 Capsella grandiflora
Cagra.17103s0001 5.0kb upstream 5.0kb upstream 9799 true Scaffold17103: 2048-11846 Capsella grandiflora
Cagra.17103s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold17103: 6847-11846 Capsella grandiflora
Cagra.17103s0001 5.0kb downstream 5.0kb downstream 6846 true Scaffold17103: 1-6846 Capsella grandiflora
Cagra.17103s0001 5.0kb downstream 5.0kb downstream 2047 false Scaffold17103: 1-2047 Capsella grandiflora
Cagra.17103s0001 10.0kb upstream 10.0kb upstream 14799 true Scaffold17103: 2048-16846 Capsella grandiflora
Cagra.17103s0001 10.0kb upstream 10.0kb upstream 10000 false Scaffold17103: 6847-16846 Capsella grandiflora
Cagra.17103s0001 10.0kb downstream 10.0kb downstream 6846 true Scaffold17103: 1-6846 Capsella grandiflora
Cagra.17103s0001 10.0kb downstream 10.0kb downstream 2047 false Scaffold17103: 1-2047 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363018 5261 Brassicaceae View MSA
123838418 5264 Brassicales-Malvales View MSA
124343876 5266 SBM View MSA
124241778 5268 Malvidae View MSA
124064064 5270 Rosid View MSA
123743223 5271 Pentapetalae View MSA
122785738 5272 Eudicot View MSA
122045516 5273 Angiosperm View MSA
121310458 5274 Embryophyte View MSA
123428657 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain