Gene : Cagra.17108s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23198:SF4 - NUCLEOPORIN AUTOPEPTIDASE Genomic Order:  1
Name:  ? Cagra.17108s0001 Secondary Identifier:  ? PAC:28899300
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.17108s0001 0.5kb upstream 0.5kb upstream 5090 true Scaffold17108: 4-5093 Capsella grandiflora
Cagra.17108s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold17108: 4594-5093 Capsella grandiflora
Cagra.17108s0001 0.5kb downstream 0.5kb downstream 4593 true Scaffold17108: 1-4593 Capsella grandiflora
Cagra.17108s0001 0.5kb downstream 0.5kb downstream 3 false Scaffold17108: 1-3 Capsella grandiflora
Cagra.17108s0001 1.0kb upstream 1.0kb upstream 5590 true Scaffold17108: 4-5593 Capsella grandiflora
Cagra.17108s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold17108: 4594-5593 Capsella grandiflora
Cagra.17108s0001 1.0kb downstream 1.0kb downstream 4593 true Scaffold17108: 1-4593 Capsella grandiflora
Cagra.17108s0001 1.0kb downstream 1.0kb downstream 3 false Scaffold17108: 1-3 Capsella grandiflora
Cagra.17108s0001 2.0kb upstream 2.0kb upstream 6590 true Scaffold17108: 4-6593 Capsella grandiflora
Cagra.17108s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold17108: 4594-6593 Capsella grandiflora
Cagra.17108s0001 2.0kb downstream 2.0kb downstream 4593 true Scaffold17108: 1-4593 Capsella grandiflora
Cagra.17108s0001 2.0kb downstream 2.0kb downstream 3 false Scaffold17108: 1-3 Capsella grandiflora
Cagra.17108s0001 5.0kb upstream 5.0kb upstream 9590 true Scaffold17108: 4-9593 Capsella grandiflora
Cagra.17108s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold17108: 4594-9593 Capsella grandiflora
Cagra.17108s0001 5.0kb downstream 5.0kb downstream 4593 true Scaffold17108: 1-4593 Capsella grandiflora
Cagra.17108s0001 5.0kb downstream 5.0kb downstream 3 false Scaffold17108: 1-3 Capsella grandiflora
Cagra.17108s0001 10.0kb upstream 10.0kb upstream 10088 true Scaffold17108: 4-10091 Capsella grandiflora
Cagra.17108s0001 10.0kb upstream 10.0kb upstream 5498 false Scaffold17108: 4594-10091 Capsella grandiflora
Cagra.17108s0001 10.0kb downstream 10.0kb downstream 4593 true Scaffold17108: 1-4593 Capsella grandiflora
Cagra.17108s0001 10.0kb downstream 10.0kb downstream 3 false Scaffold17108: 1-3 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377465 5261 Brassicaceae View MSA
123801538 5264 Brassicales-Malvales View MSA
124298828 5266 SBM View MSA
124150384 5268 Malvidae View MSA
123876005 5270 Rosid View MSA
123459742 5271 Pentapetalae View MSA
122797875 5272 Eudicot View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain