Gene : Cagra.17175s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21726//PTHR21726:SF35 - PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT P DOWN SYNDROME CRITICAL REGION PROTEIN 5 -RELATED Genomic Order:  2
Name:  ? Cagra.17175s0002 Secondary Identifier:  ? PAC:28919830
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.17175s0002 0.5kb upstream 0.5kb upstream 3836 true Scaffold17175: 1676-5511 Capsella grandiflora
Cagra.17175s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold17175: 5012-5511 Capsella grandiflora
Cagra.17175s0002 0.5kb downstream 0.5kb downstream 3836 true Scaffold17175: 1176-5011 Capsella grandiflora
Cagra.17175s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold17175: 1176-1675 Capsella grandiflora
Cagra.17175s0002 1.0kb upstream 1.0kb upstream 4336 true Scaffold17175: 1676-6011 Capsella grandiflora
Cagra.17175s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold17175: 5012-6011 Capsella grandiflora
Cagra.17175s0002 1.0kb downstream 1.0kb downstream 4336 true Scaffold17175: 676-5011 Capsella grandiflora
Cagra.17175s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold17175: 676-1675 Capsella grandiflora
Cagra.17175s0002 2.0kb upstream 2.0kb upstream 5336 true Scaffold17175: 1676-7011 Capsella grandiflora
Cagra.17175s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold17175: 5012-7011 Capsella grandiflora
Cagra.17175s0002 2.0kb downstream 2.0kb downstream 5011 true Scaffold17175: 1-5011 Capsella grandiflora
Cagra.17175s0002 2.0kb downstream 2.0kb downstream 1675 false Scaffold17175: 1-1675 Capsella grandiflora
Cagra.17175s0002 5.0kb upstream 5.0kb upstream 7108 true Scaffold17175: 1676-8783 Capsella grandiflora
Cagra.17175s0002 5.0kb upstream 5.0kb upstream 3772 false Scaffold17175: 5012-8783 Capsella grandiflora
Cagra.17175s0002 5.0kb downstream 5.0kb downstream 5011 true Scaffold17175: 1-5011 Capsella grandiflora
Cagra.17175s0002 5.0kb downstream 5.0kb downstream 1675 false Scaffold17175: 1-1675 Capsella grandiflora
Cagra.17175s0002 10.0kb upstream 10.0kb upstream 7108 true Scaffold17175: 1676-8783 Capsella grandiflora
Cagra.17175s0002 10.0kb upstream 10.0kb upstream 3772 false Scaffold17175: 5012-8783 Capsella grandiflora
Cagra.17175s0002 10.0kb downstream 10.0kb downstream 5011 true Scaffold17175: 1-5011 Capsella grandiflora
Cagra.17175s0002 10.0kb downstream 10.0kb downstream 1675 false Scaffold17175: 1-1675 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377498 5261 Brassicaceae View MSA
123831893 5264 Brassicales-Malvales View MSA
124337227 5266 SBM View MSA
124251109 5268 Malvidae View MSA
124068233 5270 Rosid View MSA
123740064 5271 Pentapetalae View MSA
122789127 5272 Eudicot View MSA
122049576 5273 Angiosperm View MSA
121350217 5274 Embryophyte View MSA
123381628 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain