Gene : Cagra.17470s0003 C. grandiflora v1.1
Defline:  (1 of 4) PTHR10209:SF127 - 2-OXOGLUTARATE (2OG) AND FE(II)-DEPENDENT OXYGENASE SUPERFAMILY PROTEIN Genomic Order:  3
Name:  ? Cagra.17470s0003 Secondary Identifier:  ? PAC:28918598
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.17470s0003 0.5kb upstream 0.5kb upstream 2345 true Scaffold17470: 5676-8020 Capsella grandiflora
Cagra.17470s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold17470: 5676-6175 Capsella grandiflora
Cagra.17470s0003 0.5kb downstream 0.5kb downstream 2345 true Scaffold17470: 6176-8520 Capsella grandiflora
Cagra.17470s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold17470: 8021-8520 Capsella grandiflora
Cagra.17470s0003 1.0kb upstream 1.0kb upstream 2845 true Scaffold17470: 5176-8020 Capsella grandiflora
Cagra.17470s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold17470: 5176-6175 Capsella grandiflora
Cagra.17470s0003 1.0kb downstream 1.0kb downstream 2845 true Scaffold17470: 6176-9020 Capsella grandiflora
Cagra.17470s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold17470: 8021-9020 Capsella grandiflora
Cagra.17470s0003 2.0kb upstream 2.0kb upstream 3845 true Scaffold17470: 4176-8020 Capsella grandiflora
Cagra.17470s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold17470: 4176-6175 Capsella grandiflora
Cagra.17470s0003 2.0kb downstream 2.0kb downstream 3845 true Scaffold17470: 6176-10020 Capsella grandiflora
Cagra.17470s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold17470: 8021-10020 Capsella grandiflora
Cagra.17470s0003 5.0kb upstream 5.0kb upstream 6845 true Scaffold17470: 1176-8020 Capsella grandiflora
Cagra.17470s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold17470: 1176-6175 Capsella grandiflora
Cagra.17470s0003 5.0kb downstream 5.0kb downstream 6845 true Scaffold17470: 6176-13020 Capsella grandiflora
Cagra.17470s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold17470: 8021-13020 Capsella grandiflora
Cagra.17470s0003 10.0kb upstream 10.0kb upstream 8020 true Scaffold17470: 1-8020 Capsella grandiflora
Cagra.17470s0003 10.0kb upstream 10.0kb upstream 6175 false Scaffold17470: 1-6175 Capsella grandiflora
Cagra.17470s0003 10.0kb downstream 10.0kb downstream 7496 true Scaffold17470: 6176-13671 Capsella grandiflora
Cagra.17470s0003 10.0kb downstream 10.0kb downstream 5651 false Scaffold17470: 8021-13671 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122360730 5261 Brassicaceae View MSA
123840503 5264 Brassicales-Malvales View MSA
124351473 5266 SBM View MSA
124247576 5268 Malvidae View MSA
124074691 5270 Rosid View MSA
123748352 5271 Pentapetalae View MSA
122795529 5272 Eudicot View MSA
122043362 5273 Angiosperm View MSA
123429101 5275 Viridiplantae View MSA
121349353 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain