Gene : Cagra.17899s0006 C. grandiflora v1.1
Defline:  (1 of 12) PF07939 - Protein of unknown function (DUF1685) (DUF1685) Genomic Order:  6
Name:  ? Cagra.17899s0006 Secondary Identifier:  ? PAC:28907085
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.17899s0006 0.5kb upstream 0.5kb upstream 1485 true Scaffold17899: 20555-22039 Capsella grandiflora
Cagra.17899s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold17899: 20555-21054 Capsella grandiflora
Cagra.17899s0006 0.5kb downstream 0.5kb downstream 1485 true Scaffold17899: 21055-22539 Capsella grandiflora
Cagra.17899s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold17899: 22040-22539 Capsella grandiflora
Cagra.17899s0006 1.0kb upstream 1.0kb upstream 1985 true Scaffold17899: 20055-22039 Capsella grandiflora
Cagra.17899s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold17899: 20055-21054 Capsella grandiflora
Cagra.17899s0006 1.0kb downstream 1.0kb downstream 1985 true Scaffold17899: 21055-23039 Capsella grandiflora
Cagra.17899s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold17899: 22040-23039 Capsella grandiflora
Cagra.17899s0006 2.0kb upstream 2.0kb upstream 2985 true Scaffold17899: 19055-22039 Capsella grandiflora
Cagra.17899s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold17899: 19055-21054 Capsella grandiflora
Cagra.17899s0006 2.0kb downstream 2.0kb downstream 2985 true Scaffold17899: 21055-24039 Capsella grandiflora
Cagra.17899s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold17899: 22040-24039 Capsella grandiflora
Cagra.17899s0006 5.0kb upstream 5.0kb upstream 5985 true Scaffold17899: 16055-22039 Capsella grandiflora
Cagra.17899s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold17899: 16055-21054 Capsella grandiflora
Cagra.17899s0006 5.0kb downstream 5.0kb downstream 5376 true Scaffold17899: 21055-26430 Capsella grandiflora
Cagra.17899s0006 5.0kb downstream 5.0kb downstream 4391 false Scaffold17899: 22040-26430 Capsella grandiflora
Cagra.17899s0006 10.0kb upstream 10.0kb upstream 10985 true Scaffold17899: 11055-22039 Capsella grandiflora
Cagra.17899s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold17899: 11055-21054 Capsella grandiflora
Cagra.17899s0006 10.0kb downstream 10.0kb downstream 5376 true Scaffold17899: 21055-26430 Capsella grandiflora
Cagra.17899s0006 10.0kb downstream 10.0kb downstream 4391 false Scaffold17899: 22040-26430 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122377649 5261 Brassicaceae View MSA
123837386 5264 Brassicales-Malvales View MSA
124350178 5266 SBM View MSA
124242501 5268 Malvidae View MSA
124067258 5270 Rosid View MSA
123744509 5271 Pentapetalae View MSA
122793651 5272 Eudicot View MSA
122045124 5273 Angiosperm View MSA
121348379 5274 Embryophyte View MSA
123380837 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain