Gene : Cagra.16119s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31561:SF2 - 3-KETOACYL-COA SYNTHASE 10 Genomic Order:  1
Name:  ? Cagra.16119s0001 Secondary Identifier:  ? PAC:28901867
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Sequence Feature Displayer

Ontology Annotation Displayer

6 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5080 Capsella grandiflora pathologic  
Cgrandiflora PWY-6433 Capsella grandiflora pathologic  
Cgrandiflora PWY-6598 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-7601 Capsella grandiflora pathologic  
Cgrandiflora PWY-7619 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.16119s0001 0.5kb upstream 0.5kb upstream 3005 true Scaffold16119: 5592-8596 Capsella grandiflora
Cagra.16119s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold16119: 5592-6091 Capsella grandiflora
Cagra.16119s0001 0.5kb downstream 0.5kb downstream 2542 true Scaffold16119: 6092-8633 Capsella grandiflora
Cagra.16119s0001 0.5kb downstream 0.5kb downstream 37 false Scaffold16119: 8597-8633 Capsella grandiflora
Cagra.16119s0001 1.0kb upstream 1.0kb upstream 3505 true Scaffold16119: 5092-8596 Capsella grandiflora
Cagra.16119s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold16119: 5092-6091 Capsella grandiflora
Cagra.16119s0001 1.0kb downstream 1.0kb downstream 2542 true Scaffold16119: 6092-8633 Capsella grandiflora
Cagra.16119s0001 1.0kb downstream 1.0kb downstream 37 false Scaffold16119: 8597-8633 Capsella grandiflora
Cagra.16119s0001 2.0kb upstream 2.0kb upstream 4505 true Scaffold16119: 4092-8596 Capsella grandiflora
Cagra.16119s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold16119: 4092-6091 Capsella grandiflora
Cagra.16119s0001 2.0kb downstream 2.0kb downstream 2542 true Scaffold16119: 6092-8633 Capsella grandiflora
Cagra.16119s0001 2.0kb downstream 2.0kb downstream 37 false Scaffold16119: 8597-8633 Capsella grandiflora
Cagra.16119s0001 5.0kb upstream 5.0kb upstream 7505 true Scaffold16119: 1092-8596 Capsella grandiflora
Cagra.16119s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold16119: 1092-6091 Capsella grandiflora
Cagra.16119s0001 5.0kb downstream 5.0kb downstream 2542 true Scaffold16119: 6092-8633 Capsella grandiflora
Cagra.16119s0001 5.0kb downstream 5.0kb downstream 37 false Scaffold16119: 8597-8633 Capsella grandiflora
Cagra.16119s0001 10.0kb upstream 10.0kb upstream 8596 true Scaffold16119: 1-8596 Capsella grandiflora
Cagra.16119s0001 10.0kb upstream 10.0kb upstream 6091 false Scaffold16119: 1-6091 Capsella grandiflora
Cagra.16119s0001 10.0kb downstream 10.0kb downstream 2542 true Scaffold16119: 6092-8633 Capsella grandiflora
Cagra.16119s0001 10.0kb downstream 10.0kb downstream 37 false Scaffold16119: 8597-8633 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365559 5261 Brassicaceae View MSA
123833929 5264 Brassicales-Malvales View MSA
124344788 5266 SBM View MSA
124251838 5268 Malvidae View MSA
124063374 5270 Rosid View MSA
123749222 5271 Pentapetalae View MSA
122793807 5272 Eudicot View MSA
122045773 5273 Angiosperm View MSA
121310500 5274 Embryophyte View MSA
123347968 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain