Gene : Cagra.16419s0001 C. grandiflora v1.1
Defline:  (1 of 1) KOG3487 - TRAPP 20 K subunit Genomic Order:  1
Name:  ? Cagra.16419s0001 Secondary Identifier:  ? PAC:28905321
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.16419s0001 0.5kb upstream 0.5kb upstream 1960 true Scaffold16419: 3782-5741 Capsella grandiflora
Cagra.16419s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold16419: 3782-4281 Capsella grandiflora
Cagra.16419s0001 0.5kb downstream 0.5kb downstream 1960 true Scaffold16419: 4282-6241 Capsella grandiflora
Cagra.16419s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold16419: 5742-6241 Capsella grandiflora
Cagra.16419s0001 1.0kb upstream 1.0kb upstream 2460 true Scaffold16419: 3282-5741 Capsella grandiflora
Cagra.16419s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold16419: 3282-4281 Capsella grandiflora
Cagra.16419s0001 1.0kb downstream 1.0kb downstream 2460 true Scaffold16419: 4282-6741 Capsella grandiflora
Cagra.16419s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold16419: 5742-6741 Capsella grandiflora
Cagra.16419s0001 2.0kb upstream 2.0kb upstream 3460 true Scaffold16419: 2282-5741 Capsella grandiflora
Cagra.16419s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold16419: 2282-4281 Capsella grandiflora
Cagra.16419s0001 2.0kb downstream 2.0kb downstream 3460 true Scaffold16419: 4282-7741 Capsella grandiflora
Cagra.16419s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold16419: 5742-7741 Capsella grandiflora
Cagra.16419s0001 5.0kb upstream 5.0kb upstream 5741 true Scaffold16419: 1-5741 Capsella grandiflora
Cagra.16419s0001 5.0kb upstream 5.0kb upstream 4281 false Scaffold16419: 1-4281 Capsella grandiflora
Cagra.16419s0001 5.0kb downstream 5.0kb downstream 6460 true Scaffold16419: 4282-10741 Capsella grandiflora
Cagra.16419s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold16419: 5742-10741 Capsella grandiflora
Cagra.16419s0001 10.0kb upstream 10.0kb upstream 5741 true Scaffold16419: 1-5741 Capsella grandiflora
Cagra.16419s0001 10.0kb upstream 10.0kb upstream 4281 false Scaffold16419: 1-4281 Capsella grandiflora
Cagra.16419s0001 10.0kb downstream 10.0kb downstream 10586 true Scaffold16419: 4282-14867 Capsella grandiflora
Cagra.16419s0001 10.0kb downstream 10.0kb downstream 9126 false Scaffold16419: 5742-14867 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122332765 5261 Brassicaceae Singleton cluster - no MSA
123839804 5264 Brassicales-Malvales View MSA
124342780 5266 SBM View MSA
124252773 5268 Malvidae View MSA
124060844 5270 Rosid View MSA
123746210 5271 Pentapetalae View MSA
122790146 5272 Eudicot View MSA
122049402 5273 Angiosperm View MSA
123429051 5275 Viridiplantae View MSA
121344946 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain