Gene : Cagra.16435s0011 C. grandiflora v1.1
Defline:  (1 of 3) PTHR11581 - 30S/40S RIBOSOMAL PROTEIN S4 Genomic Order:  11
Name:  ? Cagra.16435s0011 Secondary Identifier:  ? PAC:28912465
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.16435s0011 0.5kb upstream 0.5kb upstream 2167 true Scaffold16435: 30538-32704 Capsella grandiflora
Cagra.16435s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold16435: 30538-31037 Capsella grandiflora
Cagra.16435s0011 0.5kb downstream 0.5kb downstream 2167 true Scaffold16435: 31038-33204 Capsella grandiflora
Cagra.16435s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold16435: 32705-33204 Capsella grandiflora
Cagra.16435s0011 1.0kb upstream 1.0kb upstream 2667 true Scaffold16435: 30038-32704 Capsella grandiflora
Cagra.16435s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold16435: 30038-31037 Capsella grandiflora
Cagra.16435s0011 1.0kb downstream 1.0kb downstream 2667 true Scaffold16435: 31038-33704 Capsella grandiflora
Cagra.16435s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold16435: 32705-33704 Capsella grandiflora
Cagra.16435s0011 2.0kb upstream 2.0kb upstream 3667 true Scaffold16435: 29038-32704 Capsella grandiflora
Cagra.16435s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold16435: 29038-31037 Capsella grandiflora
Cagra.16435s0011 2.0kb downstream 2.0kb downstream 3667 true Scaffold16435: 31038-34704 Capsella grandiflora
Cagra.16435s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold16435: 32705-34704 Capsella grandiflora
Cagra.16435s0011 5.0kb upstream 5.0kb upstream 6667 true Scaffold16435: 26038-32704 Capsella grandiflora
Cagra.16435s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold16435: 26038-31037 Capsella grandiflora
Cagra.16435s0011 5.0kb downstream 5.0kb downstream 6667 true Scaffold16435: 31038-37704 Capsella grandiflora
Cagra.16435s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold16435: 32705-37704 Capsella grandiflora
Cagra.16435s0011 10.0kb upstream 10.0kb upstream 11667 true Scaffold16435: 21038-32704 Capsella grandiflora
Cagra.16435s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold16435: 21038-31037 Capsella grandiflora
Cagra.16435s0011 10.0kb downstream 10.0kb downstream 11667 true Scaffold16435: 31038-42704 Capsella grandiflora
Cagra.16435s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold16435: 32705-42704 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380883 5261 Brassicaceae View MSA
123838802 5264 Brassicales-Malvales View MSA
124336742 5266 SBM View MSA
124243857 5268 Malvidae View MSA
124070579 5270 Rosid View MSA
123750810 5271 Pentapetalae View MSA
122793916 5272 Eudicot View MSA
122046993 5273 Angiosperm View MSA
121344969 5274 Embryophyte View MSA
123426872 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain