Gene : Cagra.16435s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR33334:SF2 - GENOMIC DNA, CHROMOSOME 3, P1 CLONE: MQC3 Genomic Order:  1
Name:  ? Cagra.16435s0001 Secondary Identifier:  ? PAC:28912463
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.16435s0001 0.5kb upstream 0.5kb upstream 1737 true Scaffold16435: 1-1737 Capsella grandiflora
Cagra.16435s0001 0.5kb upstream 0.5kb upstream 19 false Scaffold16435: 1-19 Capsella grandiflora
Cagra.16435s0001 0.5kb downstream 0.5kb downstream 2218 true Scaffold16435: 20-2237 Capsella grandiflora
Cagra.16435s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold16435: 1738-2237 Capsella grandiflora
Cagra.16435s0001 1.0kb upstream 1.0kb upstream 1737 true Scaffold16435: 1-1737 Capsella grandiflora
Cagra.16435s0001 1.0kb upstream 1.0kb upstream 19 false Scaffold16435: 1-19 Capsella grandiflora
Cagra.16435s0001 1.0kb downstream 1.0kb downstream 2718 true Scaffold16435: 20-2737 Capsella grandiflora
Cagra.16435s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold16435: 1738-2737 Capsella grandiflora
Cagra.16435s0001 2.0kb upstream 2.0kb upstream 1737 true Scaffold16435: 1-1737 Capsella grandiflora
Cagra.16435s0001 2.0kb upstream 2.0kb upstream 19 false Scaffold16435: 1-19 Capsella grandiflora
Cagra.16435s0001 2.0kb downstream 2.0kb downstream 3718 true Scaffold16435: 20-3737 Capsella grandiflora
Cagra.16435s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold16435: 1738-3737 Capsella grandiflora
Cagra.16435s0001 5.0kb upstream 5.0kb upstream 1737 true Scaffold16435: 1-1737 Capsella grandiflora
Cagra.16435s0001 5.0kb upstream 5.0kb upstream 19 false Scaffold16435: 1-19 Capsella grandiflora
Cagra.16435s0001 5.0kb downstream 5.0kb downstream 6718 true Scaffold16435: 20-6737 Capsella grandiflora
Cagra.16435s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold16435: 1738-6737 Capsella grandiflora
Cagra.16435s0001 10.0kb upstream 10.0kb upstream 1737 true Scaffold16435: 1-1737 Capsella grandiflora
Cagra.16435s0001 10.0kb upstream 10.0kb upstream 19 false Scaffold16435: 1-19 Capsella grandiflora
Cagra.16435s0001 10.0kb downstream 10.0kb downstream 11718 true Scaffold16435: 20-11737 Capsella grandiflora
Cagra.16435s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold16435: 1738-11737 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365815 5261 Brassicaceae View MSA
123840813 5264 Brassicales-Malvales View MSA
124322787 5266 SBM View MSA
124248764 5268 Malvidae View MSA
124070153 5270 Rosid View MSA
123737898 5271 Pentapetalae View MSA
122796234 5272 Eudicot View MSA
122050625 5273 Angiosperm View MSA
121312034 5274 Embryophyte View MSA
123349247 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain