Gene : Cagra.16515s0002 C. grandiflora v1.1
Defline:  (1 of 3) PF07529 - HSA (HSA) Genomic Order:  2
Name:  ? Cagra.16515s0002 Secondary Identifier:  ? PAC:28916733
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.16515s0002 0.5kb upstream 0.5kb upstream 4776 true Scaffold16515: 14348-19123 Capsella grandiflora
Cagra.16515s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold16515: 14348-14847 Capsella grandiflora
Cagra.16515s0002 0.5kb downstream 0.5kb downstream 4776 true Scaffold16515: 14848-19623 Capsella grandiflora
Cagra.16515s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold16515: 19124-19623 Capsella grandiflora
Cagra.16515s0002 1.0kb upstream 1.0kb upstream 5276 true Scaffold16515: 13848-19123 Capsella grandiflora
Cagra.16515s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold16515: 13848-14847 Capsella grandiflora
Cagra.16515s0002 1.0kb downstream 1.0kb downstream 5276 true Scaffold16515: 14848-20123 Capsella grandiflora
Cagra.16515s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold16515: 19124-20123 Capsella grandiflora
Cagra.16515s0002 2.0kb upstream 2.0kb upstream 6276 true Scaffold16515: 12848-19123 Capsella grandiflora
Cagra.16515s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold16515: 12848-14847 Capsella grandiflora
Cagra.16515s0002 2.0kb downstream 2.0kb downstream 6276 true Scaffold16515: 14848-21123 Capsella grandiflora
Cagra.16515s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold16515: 19124-21123 Capsella grandiflora
Cagra.16515s0002 5.0kb upstream 5.0kb upstream 9276 true Scaffold16515: 9848-19123 Capsella grandiflora
Cagra.16515s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold16515: 9848-14847 Capsella grandiflora
Cagra.16515s0002 5.0kb downstream 5.0kb downstream 8217 true Scaffold16515: 14848-23064 Capsella grandiflora
Cagra.16515s0002 5.0kb downstream 5.0kb downstream 3941 false Scaffold16515: 19124-23064 Capsella grandiflora
Cagra.16515s0002 10.0kb upstream 10.0kb upstream 14276 true Scaffold16515: 4848-19123 Capsella grandiflora
Cagra.16515s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold16515: 4848-14847 Capsella grandiflora
Cagra.16515s0002 10.0kb downstream 10.0kb downstream 8217 true Scaffold16515: 14848-23064 Capsella grandiflora
Cagra.16515s0002 10.0kb downstream 10.0kb downstream 3941 false Scaffold16515: 19124-23064 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026618 5273 Angiosperm View MSA
122334564 5261 Brassicaceae View MSA
123775384 5264 Brassicales-Malvales View MSA
124273794 5266 SBM View MSA
124129347 5268 Malvidae View MSA
123857904 5270 Rosid View MSA
123747187 5271 Pentapetalae View MSA
122790162 5272 Eudicot View MSA
121351372 5274 Embryophyte View MSA
123428399 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain