Gene : Cagra.15507s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23130:SF95 - AUXIN-RESPONSIVE PROTEIN-RELATED Genomic Order:  1
Name:  ? Cagra.15507s0001 Secondary Identifier:  ? PAC:28919156
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15507s0001 0.5kb upstream 0.5kb upstream 2055 true Scaffold15507: 5324-7378 Capsella grandiflora
Cagra.15507s0001 0.5kb upstream 0.5kb upstream 432 false Scaffold15507: 6947-7378 Capsella grandiflora
Cagra.15507s0001 0.5kb downstream 0.5kb downstream 2123 true Scaffold15507: 4824-6946 Capsella grandiflora
Cagra.15507s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold15507: 4824-5323 Capsella grandiflora
Cagra.15507s0001 1.0kb upstream 1.0kb upstream 2055 true Scaffold15507: 5324-7378 Capsella grandiflora
Cagra.15507s0001 1.0kb upstream 1.0kb upstream 432 false Scaffold15507: 6947-7378 Capsella grandiflora
Cagra.15507s0001 1.0kb downstream 1.0kb downstream 2623 true Scaffold15507: 4324-6946 Capsella grandiflora
Cagra.15507s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold15507: 4324-5323 Capsella grandiflora
Cagra.15507s0001 2.0kb upstream 2.0kb upstream 2055 true Scaffold15507: 5324-7378 Capsella grandiflora
Cagra.15507s0001 2.0kb upstream 2.0kb upstream 432 false Scaffold15507: 6947-7378 Capsella grandiflora
Cagra.15507s0001 2.0kb downstream 2.0kb downstream 3623 true Scaffold15507: 3324-6946 Capsella grandiflora
Cagra.15507s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold15507: 3324-5323 Capsella grandiflora
Cagra.15507s0001 5.0kb upstream 5.0kb upstream 2055 true Scaffold15507: 5324-7378 Capsella grandiflora
Cagra.15507s0001 5.0kb upstream 5.0kb upstream 432 false Scaffold15507: 6947-7378 Capsella grandiflora
Cagra.15507s0001 5.0kb downstream 5.0kb downstream 6623 true Scaffold15507: 324-6946 Capsella grandiflora
Cagra.15507s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold15507: 324-5323 Capsella grandiflora
Cagra.15507s0001 10.0kb upstream 10.0kb upstream 2055 true Scaffold15507: 5324-7378 Capsella grandiflora
Cagra.15507s0001 10.0kb upstream 10.0kb upstream 432 false Scaffold15507: 6947-7378 Capsella grandiflora
Cagra.15507s0001 10.0kb downstream 10.0kb downstream 6946 true Scaffold15507: 1-6946 Capsella grandiflora
Cagra.15507s0001 10.0kb downstream 10.0kb downstream 5323 false Scaffold15507: 1-5323 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122364734 5261 Brassicaceae View MSA
123838754 5264 Brassicales-Malvales View MSA
124336764 5266 SBM View MSA
124253692 5268 Malvidae View MSA
124072358 5270 Rosid View MSA
123745373 5271 Pentapetalae View MSA
122787845 5272 Eudicot View MSA
122050744 5273 Angiosperm View MSA
121348347 5274 Embryophyte View MSA
123428624 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain