Gene : Cagra.15542s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12686 - 3'-5' EXORIBONUCLEASE CSL4-RELATED Genomic Order:  1
Name:  ? Cagra.15542s0001 Secondary Identifier:  ? PAC:28903220
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15542s0001 0.5kb upstream 0.5kb upstream 2115 true Scaffold15542: 2424-4538 Capsella grandiflora
Cagra.15542s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold15542: 2424-2923 Capsella grandiflora
Cagra.15542s0001 0.5kb downstream 0.5kb downstream 2115 true Scaffold15542: 2924-5038 Capsella grandiflora
Cagra.15542s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold15542: 4539-5038 Capsella grandiflora
Cagra.15542s0001 1.0kb upstream 1.0kb upstream 2615 true Scaffold15542: 1924-4538 Capsella grandiflora
Cagra.15542s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold15542: 1924-2923 Capsella grandiflora
Cagra.15542s0001 1.0kb downstream 1.0kb downstream 2615 true Scaffold15542: 2924-5538 Capsella grandiflora
Cagra.15542s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold15542: 4539-5538 Capsella grandiflora
Cagra.15542s0001 2.0kb upstream 2.0kb upstream 3615 true Scaffold15542: 924-4538 Capsella grandiflora
Cagra.15542s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold15542: 924-2923 Capsella grandiflora
Cagra.15542s0001 2.0kb downstream 2.0kb downstream 3615 true Scaffold15542: 2924-6538 Capsella grandiflora
Cagra.15542s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold15542: 4539-6538 Capsella grandiflora
Cagra.15542s0001 5.0kb upstream 5.0kb upstream 4538 true Scaffold15542: 1-4538 Capsella grandiflora
Cagra.15542s0001 5.0kb upstream 5.0kb upstream 2923 false Scaffold15542: 1-2923 Capsella grandiflora
Cagra.15542s0001 5.0kb downstream 5.0kb downstream 6615 true Scaffold15542: 2924-9538 Capsella grandiflora
Cagra.15542s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold15542: 4539-9538 Capsella grandiflora
Cagra.15542s0001 10.0kb upstream 10.0kb upstream 4538 true Scaffold15542: 1-4538 Capsella grandiflora
Cagra.15542s0001 10.0kb upstream 10.0kb upstream 2923 false Scaffold15542: 1-2923 Capsella grandiflora
Cagra.15542s0001 10.0kb downstream 10.0kb downstream 8608 true Scaffold15542: 2924-11531 Capsella grandiflora
Cagra.15542s0001 10.0kb downstream 10.0kb downstream 6993 false Scaffold15542: 4539-11531 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026382 5273 Angiosperm View MSA
122375207 5261 Brassicaceae View MSA
123833671 5264 Brassicales-Malvales View MSA
124345034 5266 SBM View MSA
124239693 5268 Malvidae View MSA
124065404 5270 Rosid View MSA
123740453 5271 Pentapetalae View MSA
122786772 5272 Eudicot View MSA
121347552 5274 Embryophyte View MSA
123423947 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain