Gene : Cagra.15822s0006 C. grandiflora v1.1
Defline:  (1 of 2) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  6
Name:  ? Cagra.15822s0006 Secondary Identifier:  ? PAC:28916311
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ILEUDEG-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5910 Capsella grandiflora pathologic  
Cgrandiflora PWY-922 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15822s0006 0.5kb upstream 0.5kb upstream 3247 true Scaffold15822: 14657-17903 Capsella grandiflora
Cagra.15822s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold15822: 17404-17903 Capsella grandiflora
Cagra.15822s0006 0.5kb downstream 0.5kb downstream 3247 true Scaffold15822: 14157-17403 Capsella grandiflora
Cagra.15822s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold15822: 14157-14656 Capsella grandiflora
Cagra.15822s0006 1.0kb upstream 1.0kb upstream 3747 true Scaffold15822: 14657-18403 Capsella grandiflora
Cagra.15822s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold15822: 17404-18403 Capsella grandiflora
Cagra.15822s0006 1.0kb downstream 1.0kb downstream 3747 true Scaffold15822: 13657-17403 Capsella grandiflora
Cagra.15822s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold15822: 13657-14656 Capsella grandiflora
Cagra.15822s0006 2.0kb upstream 2.0kb upstream 4747 true Scaffold15822: 14657-19403 Capsella grandiflora
Cagra.15822s0006 2.0kb upstream 2.0kb upstream 2000 false Scaffold15822: 17404-19403 Capsella grandiflora
Cagra.15822s0006 2.0kb downstream 2.0kb downstream 4747 true Scaffold15822: 12657-17403 Capsella grandiflora
Cagra.15822s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold15822: 12657-14656 Capsella grandiflora
Cagra.15822s0006 5.0kb upstream 5.0kb upstream 7747 true Scaffold15822: 14657-22403 Capsella grandiflora
Cagra.15822s0006 5.0kb upstream 5.0kb upstream 5000 false Scaffold15822: 17404-22403 Capsella grandiflora
Cagra.15822s0006 5.0kb downstream 5.0kb downstream 7747 true Scaffold15822: 9657-17403 Capsella grandiflora
Cagra.15822s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold15822: 9657-14656 Capsella grandiflora
Cagra.15822s0006 10.0kb upstream 10.0kb upstream 12747 true Scaffold15822: 14657-27403 Capsella grandiflora
Cagra.15822s0006 10.0kb upstream 10.0kb upstream 10000 false Scaffold15822: 17404-27403 Capsella grandiflora
Cagra.15822s0006 10.0kb downstream 10.0kb downstream 12747 true Scaffold15822: 4657-17403 Capsella grandiflora
Cagra.15822s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold15822: 4657-14656 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366362 5261 Brassicaceae View MSA
123830193 5264 Brassicales-Malvales View MSA
124338092 5266 SBM View MSA
124247085 5268 Malvidae View MSA
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain