Gene : Cagra.15822s0009 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12663:SF0 - PDS5 Genomic Order:  9
Name:  ? Cagra.15822s0009 Secondary Identifier:  ? PAC:28916317
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15822s0009 0.5kb upstream 0.5kb upstream 10335 true Scaffold15822: 21591-31925 Capsella grandiflora
Cagra.15822s0009 0.5kb upstream 0.5kb upstream 500 false Scaffold15822: 31426-31925 Capsella grandiflora
Cagra.15822s0009 0.5kb downstream 0.5kb downstream 10335 true Scaffold15822: 21091-31425 Capsella grandiflora
Cagra.15822s0009 0.5kb downstream 0.5kb downstream 500 false Scaffold15822: 21091-21590 Capsella grandiflora
Cagra.15822s0009 1.0kb upstream 1.0kb upstream 10835 true Scaffold15822: 21591-32425 Capsella grandiflora
Cagra.15822s0009 1.0kb upstream 1.0kb upstream 1000 false Scaffold15822: 31426-32425 Capsella grandiflora
Cagra.15822s0009 1.0kb downstream 1.0kb downstream 10835 true Scaffold15822: 20591-31425 Capsella grandiflora
Cagra.15822s0009 1.0kb downstream 1.0kb downstream 1000 false Scaffold15822: 20591-21590 Capsella grandiflora
Cagra.15822s0009 2.0kb upstream 2.0kb upstream 11835 true Scaffold15822: 21591-33425 Capsella grandiflora
Cagra.15822s0009 2.0kb upstream 2.0kb upstream 2000 false Scaffold15822: 31426-33425 Capsella grandiflora
Cagra.15822s0009 2.0kb downstream 2.0kb downstream 11835 true Scaffold15822: 19591-31425 Capsella grandiflora
Cagra.15822s0009 2.0kb downstream 2.0kb downstream 2000 false Scaffold15822: 19591-21590 Capsella grandiflora
Cagra.15822s0009 5.0kb upstream 5.0kb upstream 14835 true Scaffold15822: 21591-36425 Capsella grandiflora
Cagra.15822s0009 5.0kb upstream 5.0kb upstream 5000 false Scaffold15822: 31426-36425 Capsella grandiflora
Cagra.15822s0009 5.0kb downstream 5.0kb downstream 14835 true Scaffold15822: 16591-31425 Capsella grandiflora
Cagra.15822s0009 5.0kb downstream 5.0kb downstream 5000 false Scaffold15822: 16591-21590 Capsella grandiflora
Cagra.15822s0009 10.0kb upstream 10.0kb upstream 19835 true Scaffold15822: 21591-41425 Capsella grandiflora
Cagra.15822s0009 10.0kb upstream 10.0kb upstream 10000 false Scaffold15822: 31426-41425 Capsella grandiflora
Cagra.15822s0009 10.0kb downstream 10.0kb downstream 19835 true Scaffold15822: 11591-31425 Capsella grandiflora
Cagra.15822s0009 10.0kb downstream 10.0kb downstream 10000 false Scaffold15822: 11591-21590 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372463 5261 Brassicaceae View MSA
123839635 5264 Brassicales-Malvales View MSA
124344813 5266 SBM View MSA
124238280 5268 Malvidae View MSA
124050365 5270 Rosid View MSA
123751291 5271 Pentapetalae View MSA
122791249 5272 Eudicot View MSA
122045093 5273 Angiosperm View MSA
121348998 5274 Embryophyte View MSA
123426721 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain