Gene : Cagra.0001s0019 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31636:SF2 - SCARECROW-LIKE PROTEIN 18 Genomic Order:  19
Name:  ? Cagra.0001s0019 Secondary Identifier:  ? PAC:28894713
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.0001s0019 0.5kb upstream 0.5kb upstream 1844 true Scaffold1: 77334-79177 Capsella grandiflora
Cagra.0001s0019 0.5kb upstream 0.5kb upstream 500 false Scaffold1: 78678-79177 Capsella grandiflora
Cagra.0001s0019 0.5kb downstream 0.5kb downstream 1844 true Scaffold1: 76834-78677 Capsella grandiflora
Cagra.0001s0019 0.5kb downstream 0.5kb downstream 500 false Scaffold1: 76834-77333 Capsella grandiflora
Cagra.0001s0019 1.0kb upstream 1.0kb upstream 2344 true Scaffold1: 77334-79677 Capsella grandiflora
Cagra.0001s0019 1.0kb upstream 1.0kb upstream 1000 false Scaffold1: 78678-79677 Capsella grandiflora
Cagra.0001s0019 1.0kb downstream 1.0kb downstream 2344 true Scaffold1: 76334-78677 Capsella grandiflora
Cagra.0001s0019 1.0kb downstream 1.0kb downstream 1000 false Scaffold1: 76334-77333 Capsella grandiflora
Cagra.0001s0019 2.0kb upstream 2.0kb upstream 3344 true Scaffold1: 77334-80677 Capsella grandiflora
Cagra.0001s0019 2.0kb upstream 2.0kb upstream 2000 false Scaffold1: 78678-80677 Capsella grandiflora
Cagra.0001s0019 2.0kb downstream 2.0kb downstream 3344 true Scaffold1: 75334-78677 Capsella grandiflora
Cagra.0001s0019 2.0kb downstream 2.0kb downstream 2000 false Scaffold1: 75334-77333 Capsella grandiflora
Cagra.0001s0019 5.0kb upstream 5.0kb upstream 6344 true Scaffold1: 77334-83677 Capsella grandiflora
Cagra.0001s0019 5.0kb upstream 5.0kb upstream 5000 false Scaffold1: 78678-83677 Capsella grandiflora
Cagra.0001s0019 5.0kb downstream 5.0kb downstream 6344 true Scaffold1: 72334-78677 Capsella grandiflora
Cagra.0001s0019 5.0kb downstream 5.0kb downstream 5000 false Scaffold1: 72334-77333 Capsella grandiflora
Cagra.0001s0019 10.0kb upstream 10.0kb upstream 11344 true Scaffold1: 77334-88677 Capsella grandiflora
Cagra.0001s0019 10.0kb upstream 10.0kb upstream 10000 false Scaffold1: 78678-88677 Capsella grandiflora
Cagra.0001s0019 10.0kb downstream 10.0kb downstream 11344 true Scaffold1: 67334-78677 Capsella grandiflora
Cagra.0001s0019 10.0kb downstream 10.0kb downstream 10000 false Scaffold1: 67334-77333 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122361733 5261 Brassicaceae View MSA
123832750 5264 Brassicales-Malvales View MSA
124344585 5266 SBM View MSA
124248059 5268 Malvidae View MSA
124068320 5270 Rosid View MSA
123745954 5271 Pentapetalae View MSA
122792693 5272 Eudicot View MSA
122041925 5273 Angiosperm View MSA
121350442 5274 Embryophyte View MSA
123381734 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain