Gene : Cagra.15876s0001 C. grandiflora v1.1
Defline:  (1 of 3) PTHR23105:SF48 - 60S RIBOSOMAL PROTEIN L10A-1-RELATED Genomic Order:  1
Name:  ? Cagra.15876s0001 Secondary Identifier:  ? PAC:28901508
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15876s0001 0.5kb upstream 0.5kb upstream 1864 true Scaffold15876: 20-1883 Capsella grandiflora
Cagra.15876s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold15876: 1384-1883 Capsella grandiflora
Cagra.15876s0001 0.5kb downstream 0.5kb downstream 1383 true Scaffold15876: 1-1383 Capsella grandiflora
Cagra.15876s0001 0.5kb downstream 0.5kb downstream 19 false Scaffold15876: 1-19 Capsella grandiflora
Cagra.15876s0001 1.0kb upstream 1.0kb upstream 2364 true Scaffold15876: 20-2383 Capsella grandiflora
Cagra.15876s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold15876: 1384-2383 Capsella grandiflora
Cagra.15876s0001 1.0kb downstream 1.0kb downstream 1383 true Scaffold15876: 1-1383 Capsella grandiflora
Cagra.15876s0001 1.0kb downstream 1.0kb downstream 19 false Scaffold15876: 1-19 Capsella grandiflora
Cagra.15876s0001 2.0kb upstream 2.0kb upstream 3364 true Scaffold15876: 20-3383 Capsella grandiflora
Cagra.15876s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold15876: 1384-3383 Capsella grandiflora
Cagra.15876s0001 2.0kb downstream 2.0kb downstream 1383 true Scaffold15876: 1-1383 Capsella grandiflora
Cagra.15876s0001 2.0kb downstream 2.0kb downstream 19 false Scaffold15876: 1-19 Capsella grandiflora
Cagra.15876s0001 5.0kb upstream 5.0kb upstream 6364 true Scaffold15876: 20-6383 Capsella grandiflora
Cagra.15876s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold15876: 1384-6383 Capsella grandiflora
Cagra.15876s0001 5.0kb downstream 5.0kb downstream 1383 true Scaffold15876: 1-1383 Capsella grandiflora
Cagra.15876s0001 5.0kb downstream 5.0kb downstream 19 false Scaffold15876: 1-19 Capsella grandiflora
Cagra.15876s0001 10.0kb upstream 10.0kb upstream 9287 true Scaffold15876: 20-9306 Capsella grandiflora
Cagra.15876s0001 10.0kb upstream 10.0kb upstream 7923 false Scaffold15876: 1384-9306 Capsella grandiflora
Cagra.15876s0001 10.0kb downstream 10.0kb downstream 1383 true Scaffold15876: 1-1383 Capsella grandiflora
Cagra.15876s0001 10.0kb downstream 10.0kb downstream 19 false Scaffold15876: 1-19 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122380124 5261 Brassicaceae View MSA
123837872 5264 Brassicales-Malvales View MSA
124341540 5266 SBM View MSA
124252841 5268 Malvidae View MSA
124062102 5270 Rosid View MSA
123750520 5271 Pentapetalae View MSA
122788879 5272 Eudicot View MSA
122041557 5273 Angiosperm View MSA
121346293 5274 Embryophyte View MSA
123424403 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain