Gene : Cagra.16070s0003 C. grandiflora v1.1
Defline:  (1 of 7) PTHR31044:SF19 - CARBOHYDRATE-BINDING X8 DOMAIN-CONTAINING PROTEIN-RELATED Genomic Order:  3
Name:  ? Cagra.16070s0003 Secondary Identifier:  ? PAC:28904685
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.16070s0003 0.5kb upstream 0.5kb upstream 1176 true Scaffold16070: 5971-7146 Capsella grandiflora
Cagra.16070s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold16070: 5971-6470 Capsella grandiflora
Cagra.16070s0003 0.5kb downstream 0.5kb downstream 1176 true Scaffold16070: 6471-7646 Capsella grandiflora
Cagra.16070s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold16070: 7147-7646 Capsella grandiflora
Cagra.16070s0003 1.0kb upstream 1.0kb upstream 1676 true Scaffold16070: 5471-7146 Capsella grandiflora
Cagra.16070s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold16070: 5471-6470 Capsella grandiflora
Cagra.16070s0003 1.0kb downstream 1.0kb downstream 1676 true Scaffold16070: 6471-8146 Capsella grandiflora
Cagra.16070s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold16070: 7147-8146 Capsella grandiflora
Cagra.16070s0003 2.0kb upstream 2.0kb upstream 2676 true Scaffold16070: 4471-7146 Capsella grandiflora
Cagra.16070s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold16070: 4471-6470 Capsella grandiflora
Cagra.16070s0003 2.0kb downstream 2.0kb downstream 2676 true Scaffold16070: 6471-9146 Capsella grandiflora
Cagra.16070s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold16070: 7147-9146 Capsella grandiflora
Cagra.16070s0003 5.0kb upstream 5.0kb upstream 5676 true Scaffold16070: 1471-7146 Capsella grandiflora
Cagra.16070s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold16070: 1471-6470 Capsella grandiflora
Cagra.16070s0003 5.0kb downstream 5.0kb downstream 5676 true Scaffold16070: 6471-12146 Capsella grandiflora
Cagra.16070s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold16070: 7147-12146 Capsella grandiflora
Cagra.16070s0003 10.0kb upstream 10.0kb upstream 7146 true Scaffold16070: 1-7146 Capsella grandiflora
Cagra.16070s0003 10.0kb upstream 10.0kb upstream 6470 false Scaffold16070: 1-6470 Capsella grandiflora
Cagra.16070s0003 10.0kb downstream 10.0kb downstream 6376 true Scaffold16070: 6471-12846 Capsella grandiflora
Cagra.16070s0003 10.0kb downstream 10.0kb downstream 5700 false Scaffold16070: 7147-12846 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370266 5261 Brassicaceae View MSA
123838371 5264 Brassicales-Malvales View MSA
124339311 5266 SBM View MSA
124237376 5268 Malvidae View MSA
124067142 5270 Rosid View MSA
123750670 5271 Pentapetalae View MSA
122789328 5272 Eudicot View MSA
122050272 5273 Angiosperm View MSA
123429175 5275 Viridiplantae View MSA
121349342 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain