Gene : Cagra.15997s0001 C. grandiflora v1.1
Genomic Order:  1 Name:  ? Cagra.15997s0001
Secondary Identifier:  ? PAC:28918789
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15997s0001 0.5kb upstream 0.5kb upstream 3130 true Scaffold15997: 1-3130 Capsella grandiflora
Cagra.15997s0001 0.5kb upstream 0.5kb upstream 482 false Scaffold15997: 1-482 Capsella grandiflora
Cagra.15997s0001 0.5kb downstream 0.5kb downstream 3148 true Scaffold15997: 483-3630 Capsella grandiflora
Cagra.15997s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold15997: 3131-3630 Capsella grandiflora
Cagra.15997s0001 1.0kb upstream 1.0kb upstream 3130 true Scaffold15997: 1-3130 Capsella grandiflora
Cagra.15997s0001 1.0kb upstream 1.0kb upstream 482 false Scaffold15997: 1-482 Capsella grandiflora
Cagra.15997s0001 1.0kb downstream 1.0kb downstream 3648 true Scaffold15997: 483-4130 Capsella grandiflora
Cagra.15997s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold15997: 3131-4130 Capsella grandiflora
Cagra.15997s0001 2.0kb upstream 2.0kb upstream 3130 true Scaffold15997: 1-3130 Capsella grandiflora
Cagra.15997s0001 2.0kb upstream 2.0kb upstream 482 false Scaffold15997: 1-482 Capsella grandiflora
Cagra.15997s0001 2.0kb downstream 2.0kb downstream 4648 true Scaffold15997: 483-5130 Capsella grandiflora
Cagra.15997s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold15997: 3131-5130 Capsella grandiflora
Cagra.15997s0001 5.0kb upstream 5.0kb upstream 3130 true Scaffold15997: 1-3130 Capsella grandiflora
Cagra.15997s0001 5.0kb upstream 5.0kb upstream 482 false Scaffold15997: 1-482 Capsella grandiflora
Cagra.15997s0001 5.0kb downstream 5.0kb downstream 7648 true Scaffold15997: 483-8130 Capsella grandiflora
Cagra.15997s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold15997: 3131-8130 Capsella grandiflora
Cagra.15997s0001 10.0kb upstream 10.0kb upstream 3130 true Scaffold15997: 1-3130 Capsella grandiflora
Cagra.15997s0001 10.0kb upstream 10.0kb upstream 482 false Scaffold15997: 1-482 Capsella grandiflora
Cagra.15997s0001 10.0kb downstream 10.0kb downstream 8002 true Scaffold15997: 483-8484 Capsella grandiflora
Cagra.15997s0001 10.0kb downstream 10.0kb downstream 5354 false Scaffold15997: 3131-8484 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373274 5261 Brassicaceae View MSA
123829747 5264 Brassicales-Malvales View MSA
124342711 5266 SBM View MSA
124238562 5268 Malvidae View MSA
124064185 5270 Rosid View MSA
123739646 5271 Pentapetalae View MSA
122789381 5272 Eudicot View MSA
122043203 5273 Angiosperm View MSA
121346779 5274 Embryophyte View MSA
123380443 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain