Gene : Cagra.15036s0025 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13935:SF53 - BASIC HELIX-LOOP-HELIX DOMAIN-CONTAINING PROTEIN Genomic Order:  25
Name:  ? Cagra.15036s0025 Secondary Identifier:  ? PAC:28909038
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15036s0025 0.5kb upstream 0.5kb upstream 1525 true Scaffold15036: 104213-105737 Capsella grandiflora
Cagra.15036s0025 0.5kb upstream 0.5kb upstream 500 false Scaffold15036: 105238-105737 Capsella grandiflora
Cagra.15036s0025 0.5kb downstream 0.5kb downstream 1525 true Scaffold15036: 103713-105237 Capsella grandiflora
Cagra.15036s0025 0.5kb downstream 0.5kb downstream 500 false Scaffold15036: 103713-104212 Capsella grandiflora
Cagra.15036s0025 1.0kb upstream 1.0kb upstream 2025 true Scaffold15036: 104213-106237 Capsella grandiflora
Cagra.15036s0025 1.0kb upstream 1.0kb upstream 1000 false Scaffold15036: 105238-106237 Capsella grandiflora
Cagra.15036s0025 1.0kb downstream 1.0kb downstream 2025 true Scaffold15036: 103213-105237 Capsella grandiflora
Cagra.15036s0025 1.0kb downstream 1.0kb downstream 1000 false Scaffold15036: 103213-104212 Capsella grandiflora
Cagra.15036s0025 2.0kb upstream 2.0kb upstream 3025 true Scaffold15036: 104213-107237 Capsella grandiflora
Cagra.15036s0025 2.0kb upstream 2.0kb upstream 2000 false Scaffold15036: 105238-107237 Capsella grandiflora
Cagra.15036s0025 2.0kb downstream 2.0kb downstream 3025 true Scaffold15036: 102213-105237 Capsella grandiflora
Cagra.15036s0025 2.0kb downstream 2.0kb downstream 2000 false Scaffold15036: 102213-104212 Capsella grandiflora
Cagra.15036s0025 5.0kb upstream 5.0kb upstream 6025 true Scaffold15036: 104213-110237 Capsella grandiflora
Cagra.15036s0025 5.0kb upstream 5.0kb upstream 5000 false Scaffold15036: 105238-110237 Capsella grandiflora
Cagra.15036s0025 5.0kb downstream 5.0kb downstream 6025 true Scaffold15036: 99213-105237 Capsella grandiflora
Cagra.15036s0025 5.0kb downstream 5.0kb downstream 5000 false Scaffold15036: 99213-104212 Capsella grandiflora
Cagra.15036s0025 10.0kb upstream 10.0kb upstream 11025 true Scaffold15036: 104213-115237 Capsella grandiflora
Cagra.15036s0025 10.0kb upstream 10.0kb upstream 10000 false Scaffold15036: 105238-115237 Capsella grandiflora
Cagra.15036s0025 10.0kb downstream 10.0kb downstream 11025 true Scaffold15036: 94213-105237 Capsella grandiflora
Cagra.15036s0025 10.0kb downstream 10.0kb downstream 10000 false Scaffold15036: 94213-104212 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040931 5273 Angiosperm View MSA
122379123 5261 Brassicaceae View MSA
123835451 5264 Brassicales-Malvales View MSA
124339412 5266 SBM View MSA
124249700 5268 Malvidae View MSA
124071186 5270 Rosid View MSA
123742697 5271 Pentapetalae View MSA
122795033 5272 Eudicot View MSA
121309769 5274 Embryophyte View MSA
123347432 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain