Gene : Cagra.15036s0041 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10210:SF45 - RIBOSE-PHOSPHATE PYROPHOSPHOKINASE 3, CHLOROPLASTIC Genomic Order:  41
Name:  ? Cagra.15036s0041 Secondary Identifier:  ? PAC:28909110
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY0-662 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15036s0041 0.5kb upstream 0.5kb upstream 2839 true Scaffold15036: 160449-163287 Capsella grandiflora
Cagra.15036s0041 0.5kb upstream 0.5kb upstream 500 false Scaffold15036: 160449-160948 Capsella grandiflora
Cagra.15036s0041 0.5kb downstream 0.5kb downstream 2839 true Scaffold15036: 160949-163787 Capsella grandiflora
Cagra.15036s0041 0.5kb downstream 0.5kb downstream 500 false Scaffold15036: 163288-163787 Capsella grandiflora
Cagra.15036s0041 1.0kb upstream 1.0kb upstream 3339 true Scaffold15036: 159949-163287 Capsella grandiflora
Cagra.15036s0041 1.0kb upstream 1.0kb upstream 1000 false Scaffold15036: 159949-160948 Capsella grandiflora
Cagra.15036s0041 1.0kb downstream 1.0kb downstream 3339 true Scaffold15036: 160949-164287 Capsella grandiflora
Cagra.15036s0041 1.0kb downstream 1.0kb downstream 1000 false Scaffold15036: 163288-164287 Capsella grandiflora
Cagra.15036s0041 2.0kb upstream 2.0kb upstream 4339 true Scaffold15036: 158949-163287 Capsella grandiflora
Cagra.15036s0041 2.0kb upstream 2.0kb upstream 2000 false Scaffold15036: 158949-160948 Capsella grandiflora
Cagra.15036s0041 2.0kb downstream 2.0kb downstream 4339 true Scaffold15036: 160949-165287 Capsella grandiflora
Cagra.15036s0041 2.0kb downstream 2.0kb downstream 2000 false Scaffold15036: 163288-165287 Capsella grandiflora
Cagra.15036s0041 5.0kb upstream 5.0kb upstream 7339 true Scaffold15036: 155949-163287 Capsella grandiflora
Cagra.15036s0041 5.0kb upstream 5.0kb upstream 5000 false Scaffold15036: 155949-160948 Capsella grandiflora
Cagra.15036s0041 5.0kb downstream 5.0kb downstream 7339 true Scaffold15036: 160949-168287 Capsella grandiflora
Cagra.15036s0041 5.0kb downstream 5.0kb downstream 5000 false Scaffold15036: 163288-168287 Capsella grandiflora
Cagra.15036s0041 10.0kb upstream 10.0kb upstream 12339 true Scaffold15036: 150949-163287 Capsella grandiflora
Cagra.15036s0041 10.0kb upstream 10.0kb upstream 10000 false Scaffold15036: 150949-160948 Capsella grandiflora
Cagra.15036s0041 10.0kb downstream 10.0kb downstream 12339 true Scaffold15036: 160949-173287 Capsella grandiflora
Cagra.15036s0041 10.0kb downstream 10.0kb downstream 10000 false Scaffold15036: 163288-173287 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122373386 5261 Brassicaceae View MSA
123833850 5264 Brassicales-Malvales View MSA
124338724 5266 SBM View MSA
124238778 5268 Malvidae View MSA
124068369 5270 Rosid View MSA
123738172 5271 Pentapetalae View MSA
122787555 5272 Eudicot View MSA
122048410 5273 Angiosperm View MSA
121347977 5274 Embryophyte View MSA
123424356 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain