Gene : Cagra.1004s0001 C. grandiflora v1.1
Defline:  (1 of 4) PTHR33228:SF5 - PROTEIN GLUTAMINE DUMPER 1-RELATED Genomic Order:  1
Name:  ? Cagra.1004s0001 Secondary Identifier:  ? PAC:28896539
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.1004s0001 0.5kb upstream 0.5kb upstream 1140 true Scaffold1004: 5033-6172 Capsella grandiflora
Cagra.1004s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold1004: 5033-5532 Capsella grandiflora
Cagra.1004s0001 0.5kb downstream 0.5kb downstream 1140 true Scaffold1004: 5533-6672 Capsella grandiflora
Cagra.1004s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold1004: 6173-6672 Capsella grandiflora
Cagra.1004s0001 1.0kb upstream 1.0kb upstream 1640 true Scaffold1004: 4533-6172 Capsella grandiflora
Cagra.1004s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold1004: 4533-5532 Capsella grandiflora
Cagra.1004s0001 1.0kb downstream 1.0kb downstream 1640 true Scaffold1004: 5533-7172 Capsella grandiflora
Cagra.1004s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold1004: 6173-7172 Capsella grandiflora
Cagra.1004s0001 2.0kb upstream 2.0kb upstream 2640 true Scaffold1004: 3533-6172 Capsella grandiflora
Cagra.1004s0001 2.0kb upstream 2.0kb upstream 2000 false Scaffold1004: 3533-5532 Capsella grandiflora
Cagra.1004s0001 2.0kb downstream 2.0kb downstream 2640 true Scaffold1004: 5533-8172 Capsella grandiflora
Cagra.1004s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold1004: 6173-8172 Capsella grandiflora
Cagra.1004s0001 5.0kb upstream 5.0kb upstream 5640 true Scaffold1004: 533-6172 Capsella grandiflora
Cagra.1004s0001 5.0kb upstream 5.0kb upstream 5000 false Scaffold1004: 533-5532 Capsella grandiflora
Cagra.1004s0001 5.0kb downstream 5.0kb downstream 5640 true Scaffold1004: 5533-11172 Capsella grandiflora
Cagra.1004s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold1004: 6173-11172 Capsella grandiflora
Cagra.1004s0001 10.0kb upstream 10.0kb upstream 6172 true Scaffold1004: 1-6172 Capsella grandiflora
Cagra.1004s0001 10.0kb upstream 10.0kb upstream 5532 false Scaffold1004: 1-5532 Capsella grandiflora
Cagra.1004s0001 10.0kb downstream 10.0kb downstream 10640 true Scaffold1004: 5533-16172 Capsella grandiflora
Cagra.1004s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold1004: 6173-16172 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122374232 5261 Brassicaceae View MSA
123837980 5264 Brassicales-Malvales View MSA
124350031 5266 SBM View MSA
124253904 5268 Malvidae View MSA
124063553 5270 Rosid View MSA
123752792 5271 Pentapetalae View MSA
122796809 5272 Eudicot View MSA
122048439 5273 Angiosperm View MSA
121310974 5274 Embryophyte View MSA
123348338 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain