Gene : Cagra.15150s0003 C. grandiflora v1.1
Defline:  (1 of 1) PTHR12606:SF15 - NEDD8-SPECIFIC PROTEASE 1 Genomic Order:  3
Name:  ? Cagra.15150s0003 Secondary Identifier:  ? PAC:28909443
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15150s0003 0.5kb upstream 0.5kb upstream 2194 true Scaffold15150: 14269-16462 Capsella grandiflora
Cagra.15150s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold15150: 15963-16462 Capsella grandiflora
Cagra.15150s0003 0.5kb downstream 0.5kb downstream 2194 true Scaffold15150: 13769-15962 Capsella grandiflora
Cagra.15150s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold15150: 13769-14268 Capsella grandiflora
Cagra.15150s0003 1.0kb upstream 1.0kb upstream 2694 true Scaffold15150: 14269-16962 Capsella grandiflora
Cagra.15150s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold15150: 15963-16962 Capsella grandiflora
Cagra.15150s0003 1.0kb downstream 1.0kb downstream 2694 true Scaffold15150: 13269-15962 Capsella grandiflora
Cagra.15150s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold15150: 13269-14268 Capsella grandiflora
Cagra.15150s0003 2.0kb upstream 2.0kb upstream 3694 true Scaffold15150: 14269-17962 Capsella grandiflora
Cagra.15150s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold15150: 15963-17962 Capsella grandiflora
Cagra.15150s0003 2.0kb downstream 2.0kb downstream 3694 true Scaffold15150: 12269-15962 Capsella grandiflora
Cagra.15150s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold15150: 12269-14268 Capsella grandiflora
Cagra.15150s0003 5.0kb upstream 5.0kb upstream 6694 true Scaffold15150: 14269-20962 Capsella grandiflora
Cagra.15150s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold15150: 15963-20962 Capsella grandiflora
Cagra.15150s0003 5.0kb downstream 5.0kb downstream 6694 true Scaffold15150: 9269-15962 Capsella grandiflora
Cagra.15150s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold15150: 9269-14268 Capsella grandiflora
Cagra.15150s0003 10.0kb upstream 10.0kb upstream 11694 true Scaffold15150: 14269-25962 Capsella grandiflora
Cagra.15150s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold15150: 15963-25962 Capsella grandiflora
Cagra.15150s0003 10.0kb downstream 10.0kb downstream 11694 true Scaffold15150: 4269-15962 Capsella grandiflora
Cagra.15150s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold15150: 4269-14268 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122375929 5261 Brassicaceae View MSA
123832313 5264 Brassicales-Malvales View MSA
124342759 5266 SBM View MSA
124246104 5268 Malvidae View MSA
124065120 5270 Rosid View MSA
123744954 5271 Pentapetalae View MSA
122791121 5272 Eudicot View MSA
122044999 5273 Angiosperm View MSA
121348987 5274 Embryophyte View MSA
123428480 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain