Gene : Cagra.14503s0002 C. grandiflora v1.1
Defline:  (1 of 9) 1.1.1.330 - Very-long-chain 3-oxoacyl-CoA reductase / Very-long-chain beta-ketoacyl-CoA reductase Genomic Order:  2
Name:  ? Cagra.14503s0002 Secondary Identifier:  ? PAC:28893505
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Sequence Feature Displayer

Ontology Annotation Displayer

7 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY-5080 Capsella grandiflora pathologic  
Cgrandiflora PWY-6433 Capsella grandiflora pathologic  
Cgrandiflora PWY-6598 Capsella grandiflora pathologic  
Cgrandiflora PWY-7036 Capsella grandiflora pathologic  
Cgrandiflora PWY-7601 Capsella grandiflora pathologic  
Cgrandiflora PWY-7606 Capsella grandiflora pathologic  
Cgrandiflora PWY-7619 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14503s0002 0.5kb upstream 0.5kb upstream 3867 true Scaffold14503: 9098-12964 Capsella grandiflora
Cagra.14503s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold14503: 12465-12964 Capsella grandiflora
Cagra.14503s0002 0.5kb downstream 0.5kb downstream 3867 true Scaffold14503: 8598-12464 Capsella grandiflora
Cagra.14503s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold14503: 8598-9097 Capsella grandiflora
Cagra.14503s0002 1.0kb upstream 1.0kb upstream 4367 true Scaffold14503: 9098-13464 Capsella grandiflora
Cagra.14503s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold14503: 12465-13464 Capsella grandiflora
Cagra.14503s0002 1.0kb downstream 1.0kb downstream 4367 true Scaffold14503: 8098-12464 Capsella grandiflora
Cagra.14503s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold14503: 8098-9097 Capsella grandiflora
Cagra.14503s0002 2.0kb upstream 2.0kb upstream 5367 true Scaffold14503: 9098-14464 Capsella grandiflora
Cagra.14503s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold14503: 12465-14464 Capsella grandiflora
Cagra.14503s0002 2.0kb downstream 2.0kb downstream 5367 true Scaffold14503: 7098-12464 Capsella grandiflora
Cagra.14503s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold14503: 7098-9097 Capsella grandiflora
Cagra.14503s0002 5.0kb upstream 5.0kb upstream 8367 true Scaffold14503: 9098-17464 Capsella grandiflora
Cagra.14503s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold14503: 12465-17464 Capsella grandiflora
Cagra.14503s0002 5.0kb downstream 5.0kb downstream 8367 true Scaffold14503: 4098-12464 Capsella grandiflora
Cagra.14503s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold14503: 4098-9097 Capsella grandiflora
Cagra.14503s0002 10.0kb upstream 10.0kb upstream 13367 true Scaffold14503: 9098-22464 Capsella grandiflora
Cagra.14503s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold14503: 12465-22464 Capsella grandiflora
Cagra.14503s0002 10.0kb downstream 10.0kb downstream 12464 true Scaffold14503: 1-12464 Capsella grandiflora
Cagra.14503s0002 10.0kb downstream 10.0kb downstream 9097 false Scaffold14503: 1-9097 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122368686 5261 Brassicaceae View MSA
123834692 5264 Brassicales-Malvales View MSA
124337771 5266 SBM View MSA
124252937 5268 Malvidae View MSA
124064141 5270 Rosid View MSA
123748222 5271 Pentapetalae View MSA
122791210 5272 Eudicot View MSA
122047587 5273 Angiosperm View MSA
123429133 5275 Viridiplantae View MSA
121310767 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain