Gene : Cagra.14522s0005 C. grandiflora v1.1
Defline:  (1 of 2) PF07082 - Protein of unknown function (DUF1350) (DUF1350) Genomic Order:  5
Name:  ? Cagra.14522s0005 Secondary Identifier:  ? PAC:28914943
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14522s0005 0.5kb upstream 0.5kb upstream 3428 true Scaffold14522: 17406-20833 Capsella grandiflora
Cagra.14522s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold14522: 20334-20833 Capsella grandiflora
Cagra.14522s0005 0.5kb downstream 0.5kb downstream 3428 true Scaffold14522: 16906-20333 Capsella grandiflora
Cagra.14522s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold14522: 16906-17405 Capsella grandiflora
Cagra.14522s0005 1.0kb upstream 1.0kb upstream 3928 true Scaffold14522: 17406-21333 Capsella grandiflora
Cagra.14522s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold14522: 20334-21333 Capsella grandiflora
Cagra.14522s0005 1.0kb downstream 1.0kb downstream 3928 true Scaffold14522: 16406-20333 Capsella grandiflora
Cagra.14522s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold14522: 16406-17405 Capsella grandiflora
Cagra.14522s0005 2.0kb upstream 2.0kb upstream 4928 true Scaffold14522: 17406-22333 Capsella grandiflora
Cagra.14522s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold14522: 20334-22333 Capsella grandiflora
Cagra.14522s0005 2.0kb downstream 2.0kb downstream 4928 true Scaffold14522: 15406-20333 Capsella grandiflora
Cagra.14522s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold14522: 15406-17405 Capsella grandiflora
Cagra.14522s0005 5.0kb upstream 5.0kb upstream 7928 true Scaffold14522: 17406-25333 Capsella grandiflora
Cagra.14522s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold14522: 20334-25333 Capsella grandiflora
Cagra.14522s0005 5.0kb downstream 5.0kb downstream 7928 true Scaffold14522: 12406-20333 Capsella grandiflora
Cagra.14522s0005 5.0kb downstream 5.0kb downstream 5000 false Scaffold14522: 12406-17405 Capsella grandiflora
Cagra.14522s0005 10.0kb upstream 10.0kb upstream 8474 true Scaffold14522: 17406-25879 Capsella grandiflora
Cagra.14522s0005 10.0kb upstream 10.0kb upstream 5546 false Scaffold14522: 20334-25879 Capsella grandiflora
Cagra.14522s0005 10.0kb downstream 10.0kb downstream 12928 true Scaffold14522: 7406-20333 Capsella grandiflora
Cagra.14522s0005 10.0kb downstream 10.0kb downstream 10000 false Scaffold14522: 7406-17405 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371338 5261 Brassicaceae View MSA
123834043 5264 Brassicales-Malvales View MSA
124321919 5266 SBM View MSA
124238512 5268 Malvidae View MSA
124067558 5270 Rosid View MSA
123739395 5271 Pentapetalae View MSA
122785869 5272 Eudicot View MSA
122042192 5273 Angiosperm View MSA
121344572 5274 Embryophyte View MSA
123427638 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain