Gene : Cagra.14571s0008 C. grandiflora v1.1
Defline:  (1 of 1) PTHR11014//PTHR11014:SF103 - PEPTIDASE M20 FAMILY MEMBER Genomic Order:  8
Name:  ? Cagra.14571s0008 Secondary Identifier:  ? PAC:28904909
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14571s0008 0.5kb upstream 0.5kb upstream 2768 true Scaffold14571: 23427-26194 Capsella grandiflora
Cagra.14571s0008 0.5kb upstream 0.5kb upstream 500 false Scaffold14571: 25695-26194 Capsella grandiflora
Cagra.14571s0008 0.5kb downstream 0.5kb downstream 2768 true Scaffold14571: 22927-25694 Capsella grandiflora
Cagra.14571s0008 0.5kb downstream 0.5kb downstream 500 false Scaffold14571: 22927-23426 Capsella grandiflora
Cagra.14571s0008 1.0kb upstream 1.0kb upstream 3268 true Scaffold14571: 23427-26694 Capsella grandiflora
Cagra.14571s0008 1.0kb upstream 1.0kb upstream 1000 false Scaffold14571: 25695-26694 Capsella grandiflora
Cagra.14571s0008 1.0kb downstream 1.0kb downstream 3268 true Scaffold14571: 22427-25694 Capsella grandiflora
Cagra.14571s0008 1.0kb downstream 1.0kb downstream 1000 false Scaffold14571: 22427-23426 Capsella grandiflora
Cagra.14571s0008 2.0kb upstream 2.0kb upstream 4268 true Scaffold14571: 23427-27694 Capsella grandiflora
Cagra.14571s0008 2.0kb upstream 2.0kb upstream 2000 false Scaffold14571: 25695-27694 Capsella grandiflora
Cagra.14571s0008 2.0kb downstream 2.0kb downstream 4268 true Scaffold14571: 21427-25694 Capsella grandiflora
Cagra.14571s0008 2.0kb downstream 2.0kb downstream 2000 false Scaffold14571: 21427-23426 Capsella grandiflora
Cagra.14571s0008 5.0kb upstream 5.0kb upstream 7268 true Scaffold14571: 23427-30694 Capsella grandiflora
Cagra.14571s0008 5.0kb upstream 5.0kb upstream 5000 false Scaffold14571: 25695-30694 Capsella grandiflora
Cagra.14571s0008 5.0kb downstream 5.0kb downstream 7268 true Scaffold14571: 18427-25694 Capsella grandiflora
Cagra.14571s0008 5.0kb downstream 5.0kb downstream 5000 false Scaffold14571: 18427-23426 Capsella grandiflora
Cagra.14571s0008 10.0kb upstream 10.0kb upstream 12268 true Scaffold14571: 23427-35694 Capsella grandiflora
Cagra.14571s0008 10.0kb upstream 10.0kb upstream 10000 false Scaffold14571: 25695-35694 Capsella grandiflora
Cagra.14571s0008 10.0kb downstream 10.0kb downstream 12268 true Scaffold14571: 13427-25694 Capsella grandiflora
Cagra.14571s0008 10.0kb downstream 10.0kb downstream 10000 false Scaffold14571: 13427-23426 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122371168 5261 Brassicaceae View MSA
123838990 5264 Brassicales-Malvales View MSA
124338042 5266 SBM View MSA
124245167 5268 Malvidae View MSA
124072861 5270 Rosid View MSA
123748311 5271 Pentapetalae View MSA
122791889 5272 Eudicot View MSA
122046884 5273 Angiosperm View MSA
121350602 5274 Embryophyte View MSA
123427442 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain