Gene : Cagra.15018s0005 C. grandiflora v1.1
Defline:  (1 of 2) PTHR11266:SF16 - PEROXISOMAL MEMBRANE (MPV17/PMP22) FAMILY PROTEIN Genomic Order:  5
Name:  ? Cagra.15018s0005 Secondary Identifier:  ? PAC:28894746
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15018s0005 0.5kb upstream 0.5kb upstream 1859 true Scaffold15018: 17500-19358 Capsella grandiflora
Cagra.15018s0005 0.5kb upstream 0.5kb upstream 500 false Scaffold15018: 17500-17999 Capsella grandiflora
Cagra.15018s0005 0.5kb downstream 0.5kb downstream 1859 true Scaffold15018: 18000-19858 Capsella grandiflora
Cagra.15018s0005 0.5kb downstream 0.5kb downstream 500 false Scaffold15018: 19359-19858 Capsella grandiflora
Cagra.15018s0005 1.0kb upstream 1.0kb upstream 2359 true Scaffold15018: 17000-19358 Capsella grandiflora
Cagra.15018s0005 1.0kb upstream 1.0kb upstream 1000 false Scaffold15018: 17000-17999 Capsella grandiflora
Cagra.15018s0005 1.0kb downstream 1.0kb downstream 2359 true Scaffold15018: 18000-20358 Capsella grandiflora
Cagra.15018s0005 1.0kb downstream 1.0kb downstream 1000 false Scaffold15018: 19359-20358 Capsella grandiflora
Cagra.15018s0005 2.0kb upstream 2.0kb upstream 3359 true Scaffold15018: 16000-19358 Capsella grandiflora
Cagra.15018s0005 2.0kb upstream 2.0kb upstream 2000 false Scaffold15018: 16000-17999 Capsella grandiflora
Cagra.15018s0005 2.0kb downstream 2.0kb downstream 3359 true Scaffold15018: 18000-21358 Capsella grandiflora
Cagra.15018s0005 2.0kb downstream 2.0kb downstream 2000 false Scaffold15018: 19359-21358 Capsella grandiflora
Cagra.15018s0005 5.0kb upstream 5.0kb upstream 6359 true Scaffold15018: 13000-19358 Capsella grandiflora
Cagra.15018s0005 5.0kb upstream 5.0kb upstream 5000 false Scaffold15018: 13000-17999 Capsella grandiflora
Cagra.15018s0005 5.0kb downstream 5.0kb downstream 6279 true Scaffold15018: 18000-24278 Capsella grandiflora
Cagra.15018s0005 5.0kb downstream 5.0kb downstream 4920 false Scaffold15018: 19359-24278 Capsella grandiflora
Cagra.15018s0005 10.0kb upstream 10.0kb upstream 11359 true Scaffold15018: 8000-19358 Capsella grandiflora
Cagra.15018s0005 10.0kb upstream 10.0kb upstream 10000 false Scaffold15018: 8000-17999 Capsella grandiflora
Cagra.15018s0005 10.0kb downstream 10.0kb downstream 6279 true Scaffold15018: 18000-24278 Capsella grandiflora
Cagra.15018s0005 10.0kb downstream 10.0kb downstream 4920 false Scaffold15018: 19359-24278 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122369151 5261 Brassicaceae View MSA
123840373 5264 Brassicales-Malvales View MSA
124348628 5266 SBM View MSA
124249580 5268 Malvidae View MSA
124069878 5270 Rosid View MSA
123741697 5271 Pentapetalae View MSA
122796269 5272 Eudicot View MSA
122044681 5273 Angiosperm View MSA
121345710 5274 Embryophyte View MSA
123428334 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain