Gene : Cagra.15018s0004 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31901:SF10 - AUXIN-RESPONSIVE GH3 FAMILY PROTEIN Genomic Order:  4
Name:  ? Cagra.15018s0004 Secondary Identifier:  ? PAC:28894749
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15018s0004 0.5kb upstream 0.5kb upstream 2821 true Scaffold15018: 13751-16571 Capsella grandiflora
Cagra.15018s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold15018: 16072-16571 Capsella grandiflora
Cagra.15018s0004 0.5kb downstream 0.5kb downstream 2821 true Scaffold15018: 13251-16071 Capsella grandiflora
Cagra.15018s0004 0.5kb downstream 0.5kb downstream 500 false Scaffold15018: 13251-13750 Capsella grandiflora
Cagra.15018s0004 1.0kb upstream 1.0kb upstream 3321 true Scaffold15018: 13751-17071 Capsella grandiflora
Cagra.15018s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold15018: 16072-17071 Capsella grandiflora
Cagra.15018s0004 1.0kb downstream 1.0kb downstream 3321 true Scaffold15018: 12751-16071 Capsella grandiflora
Cagra.15018s0004 1.0kb downstream 1.0kb downstream 1000 false Scaffold15018: 12751-13750 Capsella grandiflora
Cagra.15018s0004 2.0kb upstream 2.0kb upstream 4321 true Scaffold15018: 13751-18071 Capsella grandiflora
Cagra.15018s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold15018: 16072-18071 Capsella grandiflora
Cagra.15018s0004 2.0kb downstream 2.0kb downstream 4321 true Scaffold15018: 11751-16071 Capsella grandiflora
Cagra.15018s0004 2.0kb downstream 2.0kb downstream 2000 false Scaffold15018: 11751-13750 Capsella grandiflora
Cagra.15018s0004 5.0kb upstream 5.0kb upstream 7321 true Scaffold15018: 13751-21071 Capsella grandiflora
Cagra.15018s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold15018: 16072-21071 Capsella grandiflora
Cagra.15018s0004 5.0kb downstream 5.0kb downstream 7321 true Scaffold15018: 8751-16071 Capsella grandiflora
Cagra.15018s0004 5.0kb downstream 5.0kb downstream 5000 false Scaffold15018: 8751-13750 Capsella grandiflora
Cagra.15018s0004 10.0kb upstream 10.0kb upstream 10528 true Scaffold15018: 13751-24278 Capsella grandiflora
Cagra.15018s0004 10.0kb upstream 10.0kb upstream 8207 false Scaffold15018: 16072-24278 Capsella grandiflora
Cagra.15018s0004 10.0kb downstream 10.0kb downstream 12321 true Scaffold15018: 3751-16071 Capsella grandiflora
Cagra.15018s0004 10.0kb downstream 10.0kb downstream 10000 false Scaffold15018: 3751-13750 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122367679 5261 Brassicaceae View MSA
123827393 5264 Brassicales-Malvales View MSA
124343551 5266 SBM View MSA
124246939 5268 Malvidae View MSA
124061485 5270 Rosid View MSA
123750974 5271 Pentapetalae View MSA
122788178 5272 Eudicot View MSA
122044155 5273 Angiosperm View MSA
121349637 5274 Embryophyte View MSA
123381383 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain