Gene : Cagra.15036s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23198:SF4 - NUCLEOPORIN AUTOPEPTIDASE Genomic Order:  3
Name:  ? Cagra.15036s0003 Secondary Identifier:  ? PAC:28909087
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15036s0003 0.5kb upstream 0.5kb upstream 6693 true Scaffold15036: 10664-17356 Capsella grandiflora
Cagra.15036s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold15036: 16857-17356 Capsella grandiflora
Cagra.15036s0003 0.5kb downstream 0.5kb downstream 6693 true Scaffold15036: 10164-16856 Capsella grandiflora
Cagra.15036s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold15036: 10164-10663 Capsella grandiflora
Cagra.15036s0003 1.0kb upstream 1.0kb upstream 7193 true Scaffold15036: 10664-17856 Capsella grandiflora
Cagra.15036s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold15036: 16857-17856 Capsella grandiflora
Cagra.15036s0003 1.0kb downstream 1.0kb downstream 7193 true Scaffold15036: 9664-16856 Capsella grandiflora
Cagra.15036s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold15036: 9664-10663 Capsella grandiflora
Cagra.15036s0003 2.0kb upstream 2.0kb upstream 8193 true Scaffold15036: 10664-18856 Capsella grandiflora
Cagra.15036s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold15036: 16857-18856 Capsella grandiflora
Cagra.15036s0003 2.0kb downstream 2.0kb downstream 8193 true Scaffold15036: 8664-16856 Capsella grandiflora
Cagra.15036s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold15036: 8664-10663 Capsella grandiflora
Cagra.15036s0003 5.0kb upstream 5.0kb upstream 11193 true Scaffold15036: 10664-21856 Capsella grandiflora
Cagra.15036s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold15036: 16857-21856 Capsella grandiflora
Cagra.15036s0003 5.0kb downstream 5.0kb downstream 11193 true Scaffold15036: 5664-16856 Capsella grandiflora
Cagra.15036s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold15036: 5664-10663 Capsella grandiflora
Cagra.15036s0003 10.0kb upstream 10.0kb upstream 16193 true Scaffold15036: 10664-26856 Capsella grandiflora
Cagra.15036s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold15036: 16857-26856 Capsella grandiflora
Cagra.15036s0003 10.0kb downstream 10.0kb downstream 16193 true Scaffold15036: 664-16856 Capsella grandiflora
Cagra.15036s0003 10.0kb downstream 10.0kb downstream 10000 false Scaffold15036: 664-10663 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366384 5261 Brassicaceae View MSA
123831227 5264 Brassicales-Malvales View MSA
124341872 5266 SBM View MSA
124253768 5268 Malvidae View MSA
124061864 5270 Rosid View MSA
123748776 5271 Pentapetalae View MSA
122797875 5272 Eudicot View MSA
122041710 5273 Angiosperm View MSA
121349617 5274 Embryophyte View MSA
123427472 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain