Gene : Cagra.15018s0006 C. grandiflora v1.1
Defline:  (1 of 2) PTHR13832:SF193 - PROTEIN PHOSPHATASE 2C 1-RELATED Genomic Order:  6
Name:  ? Cagra.15018s0006 Secondary Identifier:  ? PAC:28894747
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15018s0006 0.5kb upstream 0.5kb upstream 3634 true Scaffold15018: 19864-23497 Capsella grandiflora
Cagra.15018s0006 0.5kb upstream 0.5kb upstream 500 false Scaffold15018: 22998-23497 Capsella grandiflora
Cagra.15018s0006 0.5kb downstream 0.5kb downstream 3634 true Scaffold15018: 19364-22997 Capsella grandiflora
Cagra.15018s0006 0.5kb downstream 0.5kb downstream 500 false Scaffold15018: 19364-19863 Capsella grandiflora
Cagra.15018s0006 1.0kb upstream 1.0kb upstream 4134 true Scaffold15018: 19864-23997 Capsella grandiflora
Cagra.15018s0006 1.0kb upstream 1.0kb upstream 1000 false Scaffold15018: 22998-23997 Capsella grandiflora
Cagra.15018s0006 1.0kb downstream 1.0kb downstream 4134 true Scaffold15018: 18864-22997 Capsella grandiflora
Cagra.15018s0006 1.0kb downstream 1.0kb downstream 1000 false Scaffold15018: 18864-19863 Capsella grandiflora
Cagra.15018s0006 2.0kb upstream 2.0kb upstream 4415 true Scaffold15018: 19864-24278 Capsella grandiflora
Cagra.15018s0006 2.0kb upstream 2.0kb upstream 1281 false Scaffold15018: 22998-24278 Capsella grandiflora
Cagra.15018s0006 2.0kb downstream 2.0kb downstream 5134 true Scaffold15018: 17864-22997 Capsella grandiflora
Cagra.15018s0006 2.0kb downstream 2.0kb downstream 2000 false Scaffold15018: 17864-19863 Capsella grandiflora
Cagra.15018s0006 5.0kb upstream 5.0kb upstream 4415 true Scaffold15018: 19864-24278 Capsella grandiflora
Cagra.15018s0006 5.0kb upstream 5.0kb upstream 1281 false Scaffold15018: 22998-24278 Capsella grandiflora
Cagra.15018s0006 5.0kb downstream 5.0kb downstream 8134 true Scaffold15018: 14864-22997 Capsella grandiflora
Cagra.15018s0006 5.0kb downstream 5.0kb downstream 5000 false Scaffold15018: 14864-19863 Capsella grandiflora
Cagra.15018s0006 10.0kb upstream 10.0kb upstream 4415 true Scaffold15018: 19864-24278 Capsella grandiflora
Cagra.15018s0006 10.0kb upstream 10.0kb upstream 1281 false Scaffold15018: 22998-24278 Capsella grandiflora
Cagra.15018s0006 10.0kb downstream 10.0kb downstream 13134 true Scaffold15018: 9864-22997 Capsella grandiflora
Cagra.15018s0006 10.0kb downstream 10.0kb downstream 10000 false Scaffold15018: 9864-19863 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122027541 5273 Angiosperm View MSA
122373602 5261 Brassicaceae View MSA
123828244 5264 Brassicales-Malvales View MSA
124338221 5266 SBM View MSA
124239512 5268 Malvidae View MSA
124064580 5270 Rosid View MSA
123739469 5271 Pentapetalae View MSA
122786449 5272 Eudicot View MSA
121350683 5274 Embryophyte View MSA
123426661 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain