Gene : Cagra.15036s0011 C. grandiflora v1.1
Defline:  (1 of 6) PTHR26402:SF526 - TWO-COMPONENT RESPONSE REGULATOR ARR15-RELATED Genomic Order:  11
Name:  ? Cagra.15036s0011 Secondary Identifier:  ? PAC:28909079
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.15036s0011 0.5kb upstream 0.5kb upstream 2031 true Scaffold15036: 50952-52982 Capsella grandiflora
Cagra.15036s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold15036: 52483-52982 Capsella grandiflora
Cagra.15036s0011 0.5kb downstream 0.5kb downstream 2031 true Scaffold15036: 50452-52482 Capsella grandiflora
Cagra.15036s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold15036: 50452-50951 Capsella grandiflora
Cagra.15036s0011 1.0kb upstream 1.0kb upstream 2531 true Scaffold15036: 50952-53482 Capsella grandiflora
Cagra.15036s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold15036: 52483-53482 Capsella grandiflora
Cagra.15036s0011 1.0kb downstream 1.0kb downstream 2531 true Scaffold15036: 49952-52482 Capsella grandiflora
Cagra.15036s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold15036: 49952-50951 Capsella grandiflora
Cagra.15036s0011 2.0kb upstream 2.0kb upstream 3531 true Scaffold15036: 50952-54482 Capsella grandiflora
Cagra.15036s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold15036: 52483-54482 Capsella grandiflora
Cagra.15036s0011 2.0kb downstream 2.0kb downstream 3531 true Scaffold15036: 48952-52482 Capsella grandiflora
Cagra.15036s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold15036: 48952-50951 Capsella grandiflora
Cagra.15036s0011 5.0kb upstream 5.0kb upstream 6531 true Scaffold15036: 50952-57482 Capsella grandiflora
Cagra.15036s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold15036: 52483-57482 Capsella grandiflora
Cagra.15036s0011 5.0kb downstream 5.0kb downstream 6531 true Scaffold15036: 45952-52482 Capsella grandiflora
Cagra.15036s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold15036: 45952-50951 Capsella grandiflora
Cagra.15036s0011 10.0kb upstream 10.0kb upstream 11531 true Scaffold15036: 50952-62482 Capsella grandiflora
Cagra.15036s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold15036: 52483-62482 Capsella grandiflora
Cagra.15036s0011 10.0kb downstream 10.0kb downstream 11531 true Scaffold15036: 40952-52482 Capsella grandiflora
Cagra.15036s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold15036: 40952-50951 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372788 5261 Brassicaceae View MSA
123841648 5264 Brassicales-Malvales View MSA
124322971 5266 SBM View MSA
124251260 5268 Malvidae View MSA
124068460 5270 Rosid View MSA
123744932 5271 Pentapetalae View MSA
122791853 5272 Eudicot View MSA
122050729 5273 Angiosperm View MSA
123428935 5275 Viridiplantae View MSA
121349796 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain