Gene : Cagra.13905s0001 C. grandiflora v1.1
Defline:  (1 of 2) PTHR12858 - RIBOSOME BIOGENESIS PROTEIN Genomic Order:  1
Name:  ? Cagra.13905s0001 Secondary Identifier:  ? PAC:28908295
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13905s0001 0.5kb upstream 0.5kb upstream 5194 true Scaffold13905: 848-6041 Capsella grandiflora
Cagra.13905s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold13905: 848-1347 Capsella grandiflora
Cagra.13905s0001 0.5kb downstream 0.5kb downstream 5194 true Scaffold13905: 1348-6541 Capsella grandiflora
Cagra.13905s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold13905: 6042-6541 Capsella grandiflora
Cagra.13905s0001 1.0kb upstream 1.0kb upstream 5694 true Scaffold13905: 348-6041 Capsella grandiflora
Cagra.13905s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold13905: 348-1347 Capsella grandiflora
Cagra.13905s0001 1.0kb downstream 1.0kb downstream 5694 true Scaffold13905: 1348-7041 Capsella grandiflora
Cagra.13905s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold13905: 6042-7041 Capsella grandiflora
Cagra.13905s0001 2.0kb upstream 2.0kb upstream 6041 true Scaffold13905: 1-6041 Capsella grandiflora
Cagra.13905s0001 2.0kb upstream 2.0kb upstream 1347 false Scaffold13905: 1-1347 Capsella grandiflora
Cagra.13905s0001 2.0kb downstream 2.0kb downstream 6694 true Scaffold13905: 1348-8041 Capsella grandiflora
Cagra.13905s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold13905: 6042-8041 Capsella grandiflora
Cagra.13905s0001 5.0kb upstream 5.0kb upstream 6041 true Scaffold13905: 1-6041 Capsella grandiflora
Cagra.13905s0001 5.0kb upstream 5.0kb upstream 1347 false Scaffold13905: 1-1347 Capsella grandiflora
Cagra.13905s0001 5.0kb downstream 5.0kb downstream 8083 true Scaffold13905: 1348-9430 Capsella grandiflora
Cagra.13905s0001 5.0kb downstream 5.0kb downstream 3389 false Scaffold13905: 6042-9430 Capsella grandiflora
Cagra.13905s0001 10.0kb upstream 10.0kb upstream 6041 true Scaffold13905: 1-6041 Capsella grandiflora
Cagra.13905s0001 10.0kb upstream 10.0kb upstream 1347 false Scaffold13905: 1-1347 Capsella grandiflora
Cagra.13905s0001 10.0kb downstream 10.0kb downstream 8083 true Scaffold13905: 1348-9430 Capsella grandiflora
Cagra.13905s0001 10.0kb downstream 10.0kb downstream 3389 false Scaffold13905: 6042-9430 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372954 5261 Brassicaceae View MSA
123830185 5264 Brassicales-Malvales View MSA
124339187 5266 SBM View MSA
124242629 5268 Malvidae View MSA
124066682 5270 Rosid View MSA
123739487 5271 Pentapetalae View MSA
122792975 5272 Eudicot View MSA
122044889 5273 Angiosperm View MSA
121347720 5274 Embryophyte View MSA
123428215 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain