Gene : Cagra.14026s0002 C. grandiflora v1.1
Defline:  (1 of 2) 2.3.1.9 - Acetyl-CoA C-acetyltransferase / Acetoacetyl-CoA thiolase Genomic Order:  2
Name:  ? Cagra.14026s0002 Secondary Identifier:  ? PAC:28919874
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora ILEUDEG-PWY Capsella grandiflora pathologic  
Cgrandiflora PWY-5910 Capsella grandiflora pathologic  
Cgrandiflora PWY-922 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14026s0002 0.5kb upstream 0.5kb upstream 3685 true Scaffold14026: 6893-10577 Capsella grandiflora
Cagra.14026s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold14026: 10078-10577 Capsella grandiflora
Cagra.14026s0002 0.5kb downstream 0.5kb downstream 3685 true Scaffold14026: 6393-10077 Capsella grandiflora
Cagra.14026s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold14026: 6393-6892 Capsella grandiflora
Cagra.14026s0002 1.0kb upstream 1.0kb upstream 4185 true Scaffold14026: 6893-11077 Capsella grandiflora
Cagra.14026s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold14026: 10078-11077 Capsella grandiflora
Cagra.14026s0002 1.0kb downstream 1.0kb downstream 4185 true Scaffold14026: 5893-10077 Capsella grandiflora
Cagra.14026s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold14026: 5893-6892 Capsella grandiflora
Cagra.14026s0002 2.0kb upstream 2.0kb upstream 5185 true Scaffold14026: 6893-12077 Capsella grandiflora
Cagra.14026s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold14026: 10078-12077 Capsella grandiflora
Cagra.14026s0002 2.0kb downstream 2.0kb downstream 5185 true Scaffold14026: 4893-10077 Capsella grandiflora
Cagra.14026s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold14026: 4893-6892 Capsella grandiflora
Cagra.14026s0002 5.0kb upstream 5.0kb upstream 8185 true Scaffold14026: 6893-15077 Capsella grandiflora
Cagra.14026s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold14026: 10078-15077 Capsella grandiflora
Cagra.14026s0002 5.0kb downstream 5.0kb downstream 8185 true Scaffold14026: 1893-10077 Capsella grandiflora
Cagra.14026s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold14026: 1893-6892 Capsella grandiflora
Cagra.14026s0002 10.0kb upstream 10.0kb upstream 13185 true Scaffold14026: 6893-20077 Capsella grandiflora
Cagra.14026s0002 10.0kb upstream 10.0kb upstream 10000 false Scaffold14026: 10078-20077 Capsella grandiflora
Cagra.14026s0002 10.0kb downstream 10.0kb downstream 10077 true Scaffold14026: 1-10077 Capsella grandiflora
Cagra.14026s0002 10.0kb downstream 10.0kb downstream 6892 false Scaffold14026: 1-6892 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122372970 5261 Brassicaceae View MSA
123829231 5264 Brassicales-Malvales View MSA
124338302 5266 SBM View MSA
124247085 5268 Malvidae View MSA
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain