Gene : Cagra.14142s0002 C. grandiflora v1.1
Defline:  (1 of 2) PTHR23075:SF3 - AAA-TYPE ATPASE FAMILY PROTEIN-RELATED Genomic Order:  2
Name:  ? Cagra.14142s0002 Secondary Identifier:  ? PAC:28916367
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14142s0002 0.5kb upstream 0.5kb upstream 3676 true Scaffold14142: 3860-7535 Capsella grandiflora
Cagra.14142s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold14142: 7036-7535 Capsella grandiflora
Cagra.14142s0002 0.5kb downstream 0.5kb downstream 3676 true Scaffold14142: 3360-7035 Capsella grandiflora
Cagra.14142s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold14142: 3360-3859 Capsella grandiflora
Cagra.14142s0002 1.0kb upstream 1.0kb upstream 4176 true Scaffold14142: 3860-8035 Capsella grandiflora
Cagra.14142s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold14142: 7036-8035 Capsella grandiflora
Cagra.14142s0002 1.0kb downstream 1.0kb downstream 4176 true Scaffold14142: 2860-7035 Capsella grandiflora
Cagra.14142s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold14142: 2860-3859 Capsella grandiflora
Cagra.14142s0002 2.0kb upstream 2.0kb upstream 5176 true Scaffold14142: 3860-9035 Capsella grandiflora
Cagra.14142s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold14142: 7036-9035 Capsella grandiflora
Cagra.14142s0002 2.0kb downstream 2.0kb downstream 5176 true Scaffold14142: 1860-7035 Capsella grandiflora
Cagra.14142s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold14142: 1860-3859 Capsella grandiflora
Cagra.14142s0002 5.0kb upstream 5.0kb upstream 6486 true Scaffold14142: 3860-10345 Capsella grandiflora
Cagra.14142s0002 5.0kb upstream 5.0kb upstream 3310 false Scaffold14142: 7036-10345 Capsella grandiflora
Cagra.14142s0002 5.0kb downstream 5.0kb downstream 7035 true Scaffold14142: 1-7035 Capsella grandiflora
Cagra.14142s0002 5.0kb downstream 5.0kb downstream 3859 false Scaffold14142: 1-3859 Capsella grandiflora
Cagra.14142s0002 10.0kb upstream 10.0kb upstream 6486 true Scaffold14142: 3860-10345 Capsella grandiflora
Cagra.14142s0002 10.0kb upstream 10.0kb upstream 3310 false Scaffold14142: 7036-10345 Capsella grandiflora
Cagra.14142s0002 10.0kb downstream 10.0kb downstream 7035 true Scaffold14142: 1-7035 Capsella grandiflora
Cagra.14142s0002 10.0kb downstream 10.0kb downstream 3859 false Scaffold14142: 1-3859 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365286 5261 Brassicaceae View MSA
123832087 5264 Brassicales-Malvales View MSA
124346721 5266 SBM View MSA
124240410 5268 Malvidae View MSA
124067712 5270 Rosid View MSA
123739044 5271 Pentapetalae View MSA
122789244 5272 Eudicot View MSA
122051121 5273 Angiosperm View MSA
121347220 5274 Embryophyte View MSA
123424543 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain