Gene : Cagra.14254s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR13011 - TFIIF-ALPHA Genomic Order:  1
Name:  ? Cagra.14254s0001 Secondary Identifier:  ? PAC:28905883
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14254s0001 0.5kb upstream 0.5kb upstream 3592 true Scaffold14254: 750-4341 Capsella grandiflora
Cagra.14254s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold14254: 750-1249 Capsella grandiflora
Cagra.14254s0001 0.5kb downstream 0.5kb downstream 3592 true Scaffold14254: 1250-4841 Capsella grandiflora
Cagra.14254s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold14254: 4342-4841 Capsella grandiflora
Cagra.14254s0001 1.0kb upstream 1.0kb upstream 4092 true Scaffold14254: 250-4341 Capsella grandiflora
Cagra.14254s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold14254: 250-1249 Capsella grandiflora
Cagra.14254s0001 1.0kb downstream 1.0kb downstream 4092 true Scaffold14254: 1250-5341 Capsella grandiflora
Cagra.14254s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold14254: 4342-5341 Capsella grandiflora
Cagra.14254s0001 2.0kb upstream 2.0kb upstream 4341 true Scaffold14254: 1-4341 Capsella grandiflora
Cagra.14254s0001 2.0kb upstream 2.0kb upstream 1249 false Scaffold14254: 1-1249 Capsella grandiflora
Cagra.14254s0001 2.0kb downstream 2.0kb downstream 5092 true Scaffold14254: 1250-6341 Capsella grandiflora
Cagra.14254s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold14254: 4342-6341 Capsella grandiflora
Cagra.14254s0001 5.0kb upstream 5.0kb upstream 4341 true Scaffold14254: 1-4341 Capsella grandiflora
Cagra.14254s0001 5.0kb upstream 5.0kb upstream 1249 false Scaffold14254: 1-1249 Capsella grandiflora
Cagra.14254s0001 5.0kb downstream 5.0kb downstream 8092 true Scaffold14254: 1250-9341 Capsella grandiflora
Cagra.14254s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold14254: 4342-9341 Capsella grandiflora
Cagra.14254s0001 10.0kb upstream 10.0kb upstream 4341 true Scaffold14254: 1-4341 Capsella grandiflora
Cagra.14254s0001 10.0kb upstream 10.0kb upstream 1249 false Scaffold14254: 1-1249 Capsella grandiflora
Cagra.14254s0001 10.0kb downstream 10.0kb downstream 13092 true Scaffold14254: 1250-14341 Capsella grandiflora
Cagra.14254s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold14254: 4342-14341 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122370184 5261 Brassicaceae View MSA
123836960 5264 Brassicales-Malvales View MSA
124341306 5266 SBM View MSA
124237328 5268 Malvidae View MSA
124061584 5270 Rosid View MSA
123740754 5271 Pentapetalae View MSA
122785795 5272 Eudicot View MSA
122042161 5273 Angiosperm View MSA
121347251 5274 Embryophyte View MSA
123426399 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain