Gene : Cagra.14254s0004 C. grandiflora v1.1
Defline:  (1 of 3) PTHR18966:SF117 - GLUTAMATE RECEPTOR IIA-RELATED Genomic Order:  4
Name:  ? Cagra.14254s0004 Secondary Identifier:  ? PAC:28905884
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14254s0004 0.5kb upstream 0.5kb upstream 2616 true Scaffold14254: 17768-20383 Capsella grandiflora
Cagra.14254s0004 0.5kb upstream 0.5kb upstream 500 false Scaffold14254: 17768-18267 Capsella grandiflora
Cagra.14254s0004 0.5kb downstream 0.5kb downstream 2129 true Scaffold14254: 18268-20396 Capsella grandiflora
Cagra.14254s0004 0.5kb downstream 0.5kb downstream 13 false Scaffold14254: 20384-20396 Capsella grandiflora
Cagra.14254s0004 1.0kb upstream 1.0kb upstream 3116 true Scaffold14254: 17268-20383 Capsella grandiflora
Cagra.14254s0004 1.0kb upstream 1.0kb upstream 1000 false Scaffold14254: 17268-18267 Capsella grandiflora
Cagra.14254s0004 1.0kb downstream 1.0kb downstream 2129 true Scaffold14254: 18268-20396 Capsella grandiflora
Cagra.14254s0004 1.0kb downstream 1.0kb downstream 13 false Scaffold14254: 20384-20396 Capsella grandiflora
Cagra.14254s0004 2.0kb upstream 2.0kb upstream 4116 true Scaffold14254: 16268-20383 Capsella grandiflora
Cagra.14254s0004 2.0kb upstream 2.0kb upstream 2000 false Scaffold14254: 16268-18267 Capsella grandiflora
Cagra.14254s0004 2.0kb downstream 2.0kb downstream 2129 true Scaffold14254: 18268-20396 Capsella grandiflora
Cagra.14254s0004 2.0kb downstream 2.0kb downstream 13 false Scaffold14254: 20384-20396 Capsella grandiflora
Cagra.14254s0004 5.0kb upstream 5.0kb upstream 7116 true Scaffold14254: 13268-20383 Capsella grandiflora
Cagra.14254s0004 5.0kb upstream 5.0kb upstream 5000 false Scaffold14254: 13268-18267 Capsella grandiflora
Cagra.14254s0004 5.0kb downstream 5.0kb downstream 2129 true Scaffold14254: 18268-20396 Capsella grandiflora
Cagra.14254s0004 5.0kb downstream 5.0kb downstream 13 false Scaffold14254: 20384-20396 Capsella grandiflora
Cagra.14254s0004 10.0kb upstream 10.0kb upstream 12116 true Scaffold14254: 8268-20383 Capsella grandiflora
Cagra.14254s0004 10.0kb upstream 10.0kb upstream 10000 false Scaffold14254: 8268-18267 Capsella grandiflora
Cagra.14254s0004 10.0kb downstream 10.0kb downstream 2129 true Scaffold14254: 18268-20396 Capsella grandiflora
Cagra.14254s0004 10.0kb downstream 10.0kb downstream 13 false Scaffold14254: 20384-20396 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121782834 5273 Angiosperm View MSA
122332585 5261 Brassicaceae Singleton cluster - no MSA
123773641 5264 Brassicales-Malvales Singleton cluster - no MSA
124272115 5266 SBM Singleton cluster - no MSA
124255539 5268 Malvidae View MSA
123953208 5270 Rosid View MSA
123753958 5271 Pentapetalae View MSA
122775378 5272 Eudicot View MSA
121054337 5274 Embryophyte View MSA
123094323 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain