Gene : Cagra.14373s0002 C. grandiflora v1.1
Defline:  (1 of 1) PTHR21686:SF12 - DEOXYNUCLEOTIDYLTRANSFERASE TERMINAL-INTERACTING PROTEIN 2 Genomic Order:  2
Name:  ? Cagra.14373s0002 Secondary Identifier:  ? PAC:28899288
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14373s0002 0.5kb upstream 0.5kb upstream 2252 true Scaffold14373: 3005-5256 Capsella grandiflora
Cagra.14373s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold14373: 3005-3504 Capsella grandiflora
Cagra.14373s0002 0.5kb downstream 0.5kb downstream 2252 true Scaffold14373: 3505-5756 Capsella grandiflora
Cagra.14373s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold14373: 5257-5756 Capsella grandiflora
Cagra.14373s0002 1.0kb upstream 1.0kb upstream 2752 true Scaffold14373: 2505-5256 Capsella grandiflora
Cagra.14373s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold14373: 2505-3504 Capsella grandiflora
Cagra.14373s0002 1.0kb downstream 1.0kb downstream 2752 true Scaffold14373: 3505-6256 Capsella grandiflora
Cagra.14373s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold14373: 5257-6256 Capsella grandiflora
Cagra.14373s0002 2.0kb upstream 2.0kb upstream 3752 true Scaffold14373: 1505-5256 Capsella grandiflora
Cagra.14373s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold14373: 1505-3504 Capsella grandiflora
Cagra.14373s0002 2.0kb downstream 2.0kb downstream 3752 true Scaffold14373: 3505-7256 Capsella grandiflora
Cagra.14373s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold14373: 5257-7256 Capsella grandiflora
Cagra.14373s0002 5.0kb upstream 5.0kb upstream 5256 true Scaffold14373: 1-5256 Capsella grandiflora
Cagra.14373s0002 5.0kb upstream 5.0kb upstream 3504 false Scaffold14373: 1-3504 Capsella grandiflora
Cagra.14373s0002 5.0kb downstream 5.0kb downstream 5747 true Scaffold14373: 3505-9251 Capsella grandiflora
Cagra.14373s0002 5.0kb downstream 5.0kb downstream 3995 false Scaffold14373: 5257-9251 Capsella grandiflora
Cagra.14373s0002 10.0kb upstream 10.0kb upstream 5256 true Scaffold14373: 1-5256 Capsella grandiflora
Cagra.14373s0002 10.0kb upstream 10.0kb upstream 3504 false Scaffold14373: 1-3504 Capsella grandiflora
Cagra.14373s0002 10.0kb downstream 10.0kb downstream 5747 true Scaffold14373: 3505-9251 Capsella grandiflora
Cagra.14373s0002 10.0kb downstream 10.0kb downstream 3995 false Scaffold14373: 5257-9251 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122028901 5273 Angiosperm View MSA
122369333 5261 Brassicaceae View MSA
123827991 5264 Brassicales-Malvales View MSA
124343269 5266 SBM View MSA
124245117 5268 Malvidae View MSA
124072878 5270 Rosid View MSA
123738912 5271 Pentapetalae View MSA
122787489 5272 Eudicot View MSA
121349839 5274 Embryophyte View MSA
123427981 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain