Gene : Cagra.14303s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR21588 - COILED-COIL-HELIX-COILED-COIL-HELIX DOMAIN CONTAINING 6 Genomic Order:  3
Name:  ? Cagra.14303s0003 Secondary Identifier:  ? PAC:28894356
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14303s0003 0.5kb upstream 0.5kb upstream 2044 true Scaffold14303: 11482-13525 Capsella grandiflora
Cagra.14303s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold14303: 11482-11981 Capsella grandiflora
Cagra.14303s0003 0.5kb downstream 0.5kb downstream 2044 true Scaffold14303: 11982-14025 Capsella grandiflora
Cagra.14303s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold14303: 13526-14025 Capsella grandiflora
Cagra.14303s0003 1.0kb upstream 1.0kb upstream 2544 true Scaffold14303: 10982-13525 Capsella grandiflora
Cagra.14303s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold14303: 10982-11981 Capsella grandiflora
Cagra.14303s0003 1.0kb downstream 1.0kb downstream 2544 true Scaffold14303: 11982-14525 Capsella grandiflora
Cagra.14303s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold14303: 13526-14525 Capsella grandiflora
Cagra.14303s0003 2.0kb upstream 2.0kb upstream 3544 true Scaffold14303: 9982-13525 Capsella grandiflora
Cagra.14303s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold14303: 9982-11981 Capsella grandiflora
Cagra.14303s0003 2.0kb downstream 2.0kb downstream 3544 true Scaffold14303: 11982-15525 Capsella grandiflora
Cagra.14303s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold14303: 13526-15525 Capsella grandiflora
Cagra.14303s0003 5.0kb upstream 5.0kb upstream 6544 true Scaffold14303: 6982-13525 Capsella grandiflora
Cagra.14303s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold14303: 6982-11981 Capsella grandiflora
Cagra.14303s0003 5.0kb downstream 5.0kb downstream 6544 true Scaffold14303: 11982-18525 Capsella grandiflora
Cagra.14303s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold14303: 13526-18525 Capsella grandiflora
Cagra.14303s0003 10.0kb upstream 10.0kb upstream 11544 true Scaffold14303: 1982-13525 Capsella grandiflora
Cagra.14303s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold14303: 1982-11981 Capsella grandiflora
Cagra.14303s0003 10.0kb downstream 10.0kb downstream 9287 true Scaffold14303: 11982-21268 Capsella grandiflora
Cagra.14303s0003 10.0kb downstream 10.0kb downstream 7743 false Scaffold14303: 13526-21268 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122378163 5261 Brassicaceae View MSA
123836037 5264 Brassicales-Malvales View MSA
124337422 5266 SBM View MSA
124250058 5268 Malvidae View MSA
124066354 5270 Rosid View MSA
123739449 5271 Pentapetalae View MSA
122789520 5272 Eudicot View MSA
122043061 5273 Angiosperm View MSA
121347219 5274 Embryophyte View MSA
123425883 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain