Gene : Cagra.14341s0001 C. grandiflora v1.1
Defline:  (1 of 19) 3.5.1.98 - Histone deacetylase / HDAC Genomic Order:  1
Name:  ? Cagra.14341s0001 Secondary Identifier:  ? PAC:28902493
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.14341s0001 0.5kb upstream 0.5kb upstream 1982 true Scaffold14341: 1-1982 Capsella grandiflora
Cagra.14341s0001 0.5kb upstream 0.5kb upstream 161 false Scaffold14341: 1-161 Capsella grandiflora
Cagra.14341s0001 0.5kb downstream 0.5kb downstream 2321 true Scaffold14341: 162-2482 Capsella grandiflora
Cagra.14341s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold14341: 1983-2482 Capsella grandiflora
Cagra.14341s0001 1.0kb upstream 1.0kb upstream 1982 true Scaffold14341: 1-1982 Capsella grandiflora
Cagra.14341s0001 1.0kb upstream 1.0kb upstream 161 false Scaffold14341: 1-161 Capsella grandiflora
Cagra.14341s0001 1.0kb downstream 1.0kb downstream 2821 true Scaffold14341: 162-2982 Capsella grandiflora
Cagra.14341s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold14341: 1983-2982 Capsella grandiflora
Cagra.14341s0001 2.0kb upstream 2.0kb upstream 1982 true Scaffold14341: 1-1982 Capsella grandiflora
Cagra.14341s0001 2.0kb upstream 2.0kb upstream 161 false Scaffold14341: 1-161 Capsella grandiflora
Cagra.14341s0001 2.0kb downstream 2.0kb downstream 3821 true Scaffold14341: 162-3982 Capsella grandiflora
Cagra.14341s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold14341: 1983-3982 Capsella grandiflora
Cagra.14341s0001 5.0kb upstream 5.0kb upstream 1982 true Scaffold14341: 1-1982 Capsella grandiflora
Cagra.14341s0001 5.0kb upstream 5.0kb upstream 161 false Scaffold14341: 1-161 Capsella grandiflora
Cagra.14341s0001 5.0kb downstream 5.0kb downstream 6821 true Scaffold14341: 162-6982 Capsella grandiflora
Cagra.14341s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold14341: 1983-6982 Capsella grandiflora
Cagra.14341s0001 10.0kb upstream 10.0kb upstream 1982 true Scaffold14341: 1-1982 Capsella grandiflora
Cagra.14341s0001 10.0kb upstream 10.0kb upstream 161 false Scaffold14341: 1-161 Capsella grandiflora
Cagra.14341s0001 10.0kb downstream 10.0kb downstream 7283 true Scaffold14341: 162-7444 Capsella grandiflora
Cagra.14341s0001 10.0kb downstream 10.0kb downstream 5462 false Scaffold14341: 1983-7444 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379917 5261 Brassicaceae View MSA
123802479 5264 Brassicales-Malvales View MSA
124299671 5266 SBM View MSA
124151019 5268 Malvidae View MSA
123876539 5270 Rosid View MSA
123460200 5271 Pentapetalae View MSA
122495578 5272 Eudicot View MSA
122051478 5273 Angiosperm View MSA
123428998 5275 Viridiplantae View MSA
121349885 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain