Gene : Cagra.13424s0011 C. grandiflora v1.1
Defline:  (1 of 5) PF07889 - Protein of unknown function (DUF1664) (DUF1664) Genomic Order:  11
Name:  ? Cagra.13424s0011 Secondary Identifier:  ? PAC:28897934
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13424s0011 0.5kb upstream 0.5kb upstream 3224 true Scaffold13424: 33856-37079 Capsella grandiflora
Cagra.13424s0011 0.5kb upstream 0.5kb upstream 500 false Scaffold13424: 36580-37079 Capsella grandiflora
Cagra.13424s0011 0.5kb downstream 0.5kb downstream 3224 true Scaffold13424: 33356-36579 Capsella grandiflora
Cagra.13424s0011 0.5kb downstream 0.5kb downstream 500 false Scaffold13424: 33356-33855 Capsella grandiflora
Cagra.13424s0011 1.0kb upstream 1.0kb upstream 3724 true Scaffold13424: 33856-37579 Capsella grandiflora
Cagra.13424s0011 1.0kb upstream 1.0kb upstream 1000 false Scaffold13424: 36580-37579 Capsella grandiflora
Cagra.13424s0011 1.0kb downstream 1.0kb downstream 3724 true Scaffold13424: 32856-36579 Capsella grandiflora
Cagra.13424s0011 1.0kb downstream 1.0kb downstream 1000 false Scaffold13424: 32856-33855 Capsella grandiflora
Cagra.13424s0011 2.0kb upstream 2.0kb upstream 4724 true Scaffold13424: 33856-38579 Capsella grandiflora
Cagra.13424s0011 2.0kb upstream 2.0kb upstream 2000 false Scaffold13424: 36580-38579 Capsella grandiflora
Cagra.13424s0011 2.0kb downstream 2.0kb downstream 4724 true Scaffold13424: 31856-36579 Capsella grandiflora
Cagra.13424s0011 2.0kb downstream 2.0kb downstream 2000 false Scaffold13424: 31856-33855 Capsella grandiflora
Cagra.13424s0011 5.0kb upstream 5.0kb upstream 7724 true Scaffold13424: 33856-41579 Capsella grandiflora
Cagra.13424s0011 5.0kb upstream 5.0kb upstream 5000 false Scaffold13424: 36580-41579 Capsella grandiflora
Cagra.13424s0011 5.0kb downstream 5.0kb downstream 7724 true Scaffold13424: 28856-36579 Capsella grandiflora
Cagra.13424s0011 5.0kb downstream 5.0kb downstream 5000 false Scaffold13424: 28856-33855 Capsella grandiflora
Cagra.13424s0011 10.0kb upstream 10.0kb upstream 12724 true Scaffold13424: 33856-46579 Capsella grandiflora
Cagra.13424s0011 10.0kb upstream 10.0kb upstream 10000 false Scaffold13424: 36580-46579 Capsella grandiflora
Cagra.13424s0011 10.0kb downstream 10.0kb downstream 12724 true Scaffold13424: 23856-36579 Capsella grandiflora
Cagra.13424s0011 10.0kb downstream 10.0kb downstream 10000 false Scaffold13424: 23856-33855 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365701 5261 Brassicaceae View MSA
123838361 5264 Brassicales-Malvales View MSA
124339218 5266 SBM View MSA
124245253 5268 Malvidae View MSA
124066515 5270 Rosid View MSA
123745740 5271 Pentapetalae View MSA
122789386 5272 Eudicot View MSA
122050291 5273 Angiosperm View MSA
121350785 5274 Embryophyte View MSA
123428058 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain