Gene : Cagra.13424s0002 C. grandiflora v1.1
Defline:  (1 of 3) PTHR31205:SF2 - ACTIN CROSS-LINKING PROTEIN Genomic Order:  2
Name:  ? Cagra.13424s0002 Secondary Identifier:  ? PAC:28897941
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13424s0002 0.5kb upstream 0.5kb upstream 4333 true Scaffold13424: 4902-9234 Capsella grandiflora
Cagra.13424s0002 0.5kb upstream 0.5kb upstream 500 false Scaffold13424: 4902-5401 Capsella grandiflora
Cagra.13424s0002 0.5kb downstream 0.5kb downstream 4333 true Scaffold13424: 5402-9734 Capsella grandiflora
Cagra.13424s0002 0.5kb downstream 0.5kb downstream 500 false Scaffold13424: 9235-9734 Capsella grandiflora
Cagra.13424s0002 1.0kb upstream 1.0kb upstream 4833 true Scaffold13424: 4402-9234 Capsella grandiflora
Cagra.13424s0002 1.0kb upstream 1.0kb upstream 1000 false Scaffold13424: 4402-5401 Capsella grandiflora
Cagra.13424s0002 1.0kb downstream 1.0kb downstream 4833 true Scaffold13424: 5402-10234 Capsella grandiflora
Cagra.13424s0002 1.0kb downstream 1.0kb downstream 1000 false Scaffold13424: 9235-10234 Capsella grandiflora
Cagra.13424s0002 2.0kb upstream 2.0kb upstream 5833 true Scaffold13424: 3402-9234 Capsella grandiflora
Cagra.13424s0002 2.0kb upstream 2.0kb upstream 2000 false Scaffold13424: 3402-5401 Capsella grandiflora
Cagra.13424s0002 2.0kb downstream 2.0kb downstream 5833 true Scaffold13424: 5402-11234 Capsella grandiflora
Cagra.13424s0002 2.0kb downstream 2.0kb downstream 2000 false Scaffold13424: 9235-11234 Capsella grandiflora
Cagra.13424s0002 5.0kb upstream 5.0kb upstream 8833 true Scaffold13424: 402-9234 Capsella grandiflora
Cagra.13424s0002 5.0kb upstream 5.0kb upstream 5000 false Scaffold13424: 402-5401 Capsella grandiflora
Cagra.13424s0002 5.0kb downstream 5.0kb downstream 8833 true Scaffold13424: 5402-14234 Capsella grandiflora
Cagra.13424s0002 5.0kb downstream 5.0kb downstream 5000 false Scaffold13424: 9235-14234 Capsella grandiflora
Cagra.13424s0002 10.0kb upstream 10.0kb upstream 9234 true Scaffold13424: 1-9234 Capsella grandiflora
Cagra.13424s0002 10.0kb upstream 10.0kb upstream 5401 false Scaffold13424: 1-5401 Capsella grandiflora
Cagra.13424s0002 10.0kb downstream 10.0kb downstream 13833 true Scaffold13424: 5402-19234 Capsella grandiflora
Cagra.13424s0002 10.0kb downstream 10.0kb downstream 10000 false Scaffold13424: 9235-19234 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122363805 5261 Brassicaceae View MSA
123831929 5264 Brassicales-Malvales View MSA
124337924 5266 SBM View MSA
124249792 5268 Malvidae View MSA
124067257 5270 Rosid View MSA
123752337 5271 Pentapetalae View MSA
122792795 5272 Eudicot View MSA
122046577 5273 Angiosperm View MSA
121350939 5274 Embryophyte View MSA
123381941 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain