Gene : Cagra.13578s0003 C. grandiflora v1.1
Defline:  (1 of 2) PTHR22884//PTHR22884:SF366 - SET DOMAIN PROTEINS Genomic Order:  3
Name:  ? Cagra.13578s0003 Secondary Identifier:  ? PAC:28915109
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13578s0003 0.5kb upstream 0.5kb upstream 4583 true Scaffold13578: 11243-15825 Capsella grandiflora
Cagra.13578s0003 0.5kb upstream 0.5kb upstream 500 false Scaffold13578: 11243-11742 Capsella grandiflora
Cagra.13578s0003 0.5kb downstream 0.5kb downstream 4583 true Scaffold13578: 11743-16325 Capsella grandiflora
Cagra.13578s0003 0.5kb downstream 0.5kb downstream 500 false Scaffold13578: 15826-16325 Capsella grandiflora
Cagra.13578s0003 1.0kb upstream 1.0kb upstream 5083 true Scaffold13578: 10743-15825 Capsella grandiflora
Cagra.13578s0003 1.0kb upstream 1.0kb upstream 1000 false Scaffold13578: 10743-11742 Capsella grandiflora
Cagra.13578s0003 1.0kb downstream 1.0kb downstream 5083 true Scaffold13578: 11743-16825 Capsella grandiflora
Cagra.13578s0003 1.0kb downstream 1.0kb downstream 1000 false Scaffold13578: 15826-16825 Capsella grandiflora
Cagra.13578s0003 2.0kb upstream 2.0kb upstream 6083 true Scaffold13578: 9743-15825 Capsella grandiflora
Cagra.13578s0003 2.0kb upstream 2.0kb upstream 2000 false Scaffold13578: 9743-11742 Capsella grandiflora
Cagra.13578s0003 2.0kb downstream 2.0kb downstream 6083 true Scaffold13578: 11743-17825 Capsella grandiflora
Cagra.13578s0003 2.0kb downstream 2.0kb downstream 2000 false Scaffold13578: 15826-17825 Capsella grandiflora
Cagra.13578s0003 5.0kb upstream 5.0kb upstream 9083 true Scaffold13578: 6743-15825 Capsella grandiflora
Cagra.13578s0003 5.0kb upstream 5.0kb upstream 5000 false Scaffold13578: 6743-11742 Capsella grandiflora
Cagra.13578s0003 5.0kb downstream 5.0kb downstream 9083 true Scaffold13578: 11743-20825 Capsella grandiflora
Cagra.13578s0003 5.0kb downstream 5.0kb downstream 5000 false Scaffold13578: 15826-20825 Capsella grandiflora
Cagra.13578s0003 10.0kb upstream 10.0kb upstream 14083 true Scaffold13578: 1743-15825 Capsella grandiflora
Cagra.13578s0003 10.0kb upstream 10.0kb upstream 10000 false Scaffold13578: 1743-11742 Capsella grandiflora
Cagra.13578s0003 10.0kb downstream 10.0kb downstream 13560 true Scaffold13578: 11743-25302 Capsella grandiflora
Cagra.13578s0003 10.0kb downstream 10.0kb downstream 9477 false Scaffold13578: 15826-25302 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122379942 5261 Brassicaceae View MSA
123837337 5264 Brassicales-Malvales View MSA
124342613 5266 SBM View MSA
124241937 5268 Malvidae View MSA
124073861 5270 Rosid View MSA
123746063 5271 Pentapetalae View MSA
122795414 5272 Eudicot View MSA
122049912 5273 Angiosperm View MSA
123428946 5275 Viridiplantae View MSA
121350319 5274 Embryophyte View MSA

0 Rna Seq Expressions

0 Strain