Gene : Cagra.13768s0001 C. grandiflora v1.1
Defline:  (1 of 1) PTHR10091:SF3 - ALDOSE 1-EPIMERASE Genomic Order:  1
Name:  ? Cagra.13768s0001 Secondary Identifier:  ? PAC:28907521
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Cgrandiflora PWY66-422 Capsella grandiflora pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13768s0001 0.5kb upstream 0.5kb upstream 2516 true Scaffold13768: 708-3223 Capsella grandiflora
Cagra.13768s0001 0.5kb upstream 0.5kb upstream 500 false Scaffold13768: 708-1207 Capsella grandiflora
Cagra.13768s0001 0.5kb downstream 0.5kb downstream 2516 true Scaffold13768: 1208-3723 Capsella grandiflora
Cagra.13768s0001 0.5kb downstream 0.5kb downstream 500 false Scaffold13768: 3224-3723 Capsella grandiflora
Cagra.13768s0001 1.0kb upstream 1.0kb upstream 3016 true Scaffold13768: 208-3223 Capsella grandiflora
Cagra.13768s0001 1.0kb upstream 1.0kb upstream 1000 false Scaffold13768: 208-1207 Capsella grandiflora
Cagra.13768s0001 1.0kb downstream 1.0kb downstream 3016 true Scaffold13768: 1208-4223 Capsella grandiflora
Cagra.13768s0001 1.0kb downstream 1.0kb downstream 1000 false Scaffold13768: 3224-4223 Capsella grandiflora
Cagra.13768s0001 2.0kb upstream 2.0kb upstream 3223 true Scaffold13768: 1-3223 Capsella grandiflora
Cagra.13768s0001 2.0kb upstream 2.0kb upstream 1207 false Scaffold13768: 1-1207 Capsella grandiflora
Cagra.13768s0001 2.0kb downstream 2.0kb downstream 4016 true Scaffold13768: 1208-5223 Capsella grandiflora
Cagra.13768s0001 2.0kb downstream 2.0kb downstream 2000 false Scaffold13768: 3224-5223 Capsella grandiflora
Cagra.13768s0001 5.0kb upstream 5.0kb upstream 3223 true Scaffold13768: 1-3223 Capsella grandiflora
Cagra.13768s0001 5.0kb upstream 5.0kb upstream 1207 false Scaffold13768: 1-1207 Capsella grandiflora
Cagra.13768s0001 5.0kb downstream 5.0kb downstream 7016 true Scaffold13768: 1208-8223 Capsella grandiflora
Cagra.13768s0001 5.0kb downstream 5.0kb downstream 5000 false Scaffold13768: 3224-8223 Capsella grandiflora
Cagra.13768s0001 10.0kb upstream 10.0kb upstream 3223 true Scaffold13768: 1-3223 Capsella grandiflora
Cagra.13768s0001 10.0kb upstream 10.0kb upstream 1207 false Scaffold13768: 1-1207 Capsella grandiflora
Cagra.13768s0001 10.0kb downstream 10.0kb downstream 12016 true Scaffold13768: 1208-13223 Capsella grandiflora
Cagra.13768s0001 10.0kb downstream 10.0kb downstream 10000 false Scaffold13768: 3224-13223 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122365500 5261 Brassicaceae View MSA
123830104 5264 Brassicales-Malvales View MSA
124340129 5266 SBM View MSA
124241568 5268 Malvidae View MSA
124062867 5270 Rosid View MSA
123744295 5271 Pentapetalae View MSA
122796241 5272 Eudicot View MSA
122044460 5273 Angiosperm View MSA
121310296 5274 Embryophyte View MSA
123425845 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain