Gene : Cagra.13768s0013 C. grandiflora v1.1
Defline:  (1 of 6) PF00443//PF04780//PF04781 - Ubiquitin carboxyl-terminal hydrolase (UCH) // Protein of unknown function (DUF629) (DUF629) // Protein of unknown function (DUF627) (DUF627) Genomic Order:  13
Name:  ? Cagra.13768s0013 Secondary Identifier:  ? PAC:28907535
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13768s0013 0.5kb upstream 0.5kb upstream 7353 true Scaffold13768: 31574-38926 Capsella grandiflora
Cagra.13768s0013 0.5kb upstream 0.5kb upstream 500 false Scaffold13768: 38427-38926 Capsella grandiflora
Cagra.13768s0013 0.5kb downstream 0.5kb downstream 7353 true Scaffold13768: 31074-38426 Capsella grandiflora
Cagra.13768s0013 0.5kb downstream 0.5kb downstream 500 false Scaffold13768: 31074-31573 Capsella grandiflora
Cagra.13768s0013 1.0kb upstream 1.0kb upstream 7853 true Scaffold13768: 31574-39426 Capsella grandiflora
Cagra.13768s0013 1.0kb upstream 1.0kb upstream 1000 false Scaffold13768: 38427-39426 Capsella grandiflora
Cagra.13768s0013 1.0kb downstream 1.0kb downstream 7853 true Scaffold13768: 30574-38426 Capsella grandiflora
Cagra.13768s0013 1.0kb downstream 1.0kb downstream 1000 false Scaffold13768: 30574-31573 Capsella grandiflora
Cagra.13768s0013 2.0kb upstream 2.0kb upstream 8853 true Scaffold13768: 31574-40426 Capsella grandiflora
Cagra.13768s0013 2.0kb upstream 2.0kb upstream 2000 false Scaffold13768: 38427-40426 Capsella grandiflora
Cagra.13768s0013 2.0kb downstream 2.0kb downstream 8853 true Scaffold13768: 29574-38426 Capsella grandiflora
Cagra.13768s0013 2.0kb downstream 2.0kb downstream 2000 false Scaffold13768: 29574-31573 Capsella grandiflora
Cagra.13768s0013 5.0kb upstream 5.0kb upstream 11853 true Scaffold13768: 31574-43426 Capsella grandiflora
Cagra.13768s0013 5.0kb upstream 5.0kb upstream 5000 false Scaffold13768: 38427-43426 Capsella grandiflora
Cagra.13768s0013 5.0kb downstream 5.0kb downstream 11853 true Scaffold13768: 26574-38426 Capsella grandiflora
Cagra.13768s0013 5.0kb downstream 5.0kb downstream 5000 false Scaffold13768: 26574-31573 Capsella grandiflora
Cagra.13768s0013 10.0kb upstream 10.0kb upstream 16853 true Scaffold13768: 31574-48426 Capsella grandiflora
Cagra.13768s0013 10.0kb upstream 10.0kb upstream 10000 false Scaffold13768: 38427-48426 Capsella grandiflora
Cagra.13768s0013 10.0kb downstream 10.0kb downstream 16853 true Scaffold13768: 21574-38426 Capsella grandiflora
Cagra.13768s0013 10.0kb downstream 10.0kb downstream 10000 false Scaffold13768: 21574-31573 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122338582 5261 Brassicaceae View MSA
123841591 5264 Brassicales-Malvales View MSA
124340866 5266 SBM View MSA
124252136 5268 Malvidae View MSA
124072872 5270 Rosid View MSA
123749894 5271 Pentapetalae View MSA
122797305 5272 Eudicot View MSA
122047573 5273 Angiosperm View MSA
121346745 5274 Embryophyte View MSA
123380438 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain