Gene : Cagra.13768s0012 C. grandiflora v1.1
Defline:  (1 of 1) PTHR31301:SF21 - LOB DOMAIN-CONTAINING PROTEIN 27 Genomic Order:  12
Name:  ? Cagra.13768s0012 Secondary Identifier:  ? PAC:28907525
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Cagra.13768s0012 0.5kb upstream 0.5kb upstream 1752 true Scaffold13768: 28825-30576 Capsella grandiflora
Cagra.13768s0012 0.5kb upstream 0.5kb upstream 500 false Scaffold13768: 30077-30576 Capsella grandiflora
Cagra.13768s0012 0.5kb downstream 0.5kb downstream 1752 true Scaffold13768: 28325-30076 Capsella grandiflora
Cagra.13768s0012 0.5kb downstream 0.5kb downstream 500 false Scaffold13768: 28325-28824 Capsella grandiflora
Cagra.13768s0012 1.0kb upstream 1.0kb upstream 2252 true Scaffold13768: 28825-31076 Capsella grandiflora
Cagra.13768s0012 1.0kb upstream 1.0kb upstream 1000 false Scaffold13768: 30077-31076 Capsella grandiflora
Cagra.13768s0012 1.0kb downstream 1.0kb downstream 2252 true Scaffold13768: 27825-30076 Capsella grandiflora
Cagra.13768s0012 1.0kb downstream 1.0kb downstream 1000 false Scaffold13768: 27825-28824 Capsella grandiflora
Cagra.13768s0012 2.0kb upstream 2.0kb upstream 3252 true Scaffold13768: 28825-32076 Capsella grandiflora
Cagra.13768s0012 2.0kb upstream 2.0kb upstream 2000 false Scaffold13768: 30077-32076 Capsella grandiflora
Cagra.13768s0012 2.0kb downstream 2.0kb downstream 3252 true Scaffold13768: 26825-30076 Capsella grandiflora
Cagra.13768s0012 2.0kb downstream 2.0kb downstream 2000 false Scaffold13768: 26825-28824 Capsella grandiflora
Cagra.13768s0012 5.0kb upstream 5.0kb upstream 6252 true Scaffold13768: 28825-35076 Capsella grandiflora
Cagra.13768s0012 5.0kb upstream 5.0kb upstream 5000 false Scaffold13768: 30077-35076 Capsella grandiflora
Cagra.13768s0012 5.0kb downstream 5.0kb downstream 6252 true Scaffold13768: 23825-30076 Capsella grandiflora
Cagra.13768s0012 5.0kb downstream 5.0kb downstream 5000 false Scaffold13768: 23825-28824 Capsella grandiflora
Cagra.13768s0012 10.0kb upstream 10.0kb upstream 11252 true Scaffold13768: 28825-40076 Capsella grandiflora
Cagra.13768s0012 10.0kb upstream 10.0kb upstream 10000 false Scaffold13768: 30077-40076 Capsella grandiflora
Cagra.13768s0012 10.0kb downstream 10.0kb downstream 11252 true Scaffold13768: 18825-30076 Capsella grandiflora
Cagra.13768s0012 10.0kb downstream 10.0kb downstream 10000 false Scaffold13768: 18825-28824 Capsella grandiflora

10 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122366902 5261 Brassicaceae View MSA
123835870 5264 Brassicales-Malvales View MSA
124343645 5266 SBM View MSA
124243498 5268 Malvidae View MSA
124072820 5270 Rosid View MSA
123752210 5271 Pentapetalae View MSA
122796223 5272 Eudicot View MSA
122048133 5273 Angiosperm View MSA
121350574 5274 Embryophyte View MSA
123381803 5275 Viridiplantae View MSA

0 Rna Seq Expressions

0 Strain